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Core genomes of cosmopolitan surface ocean plankton
The sunlight surface layer of the ocean is the largest contiguous biome on the planet. The photoautotrophic microbial communities in the ocean fix roughly equal amounts of CO2... -
Reconstructing whole planktic communities from archival samples fixed in form...
Sequence data of DNA extracted from formalin-preserved planktic samples. We tested nine different lysis solution to reverse the cross-linkage formed between the molecules by... -
Amarsipidae genomic sequencing
Whole-genome shotgun sequence data from Amarsipidae was produced for assembling phylogenetically informative loci. -
Salps_Pteropod_microbes
The microbial cell 16S rRNA gene sequences associated with salps and pteropods from the Gulf Stream off West Palm Beach, Florida. -
Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1)...
The overall objective of this project (Baselines Initiative) is to generate several 16S rRNA gene databases to establish robust baseline information on the biological... -
Metabarcoding analysis of planktonic copepdos in the Izu Ridge
This project aimed to characterize copepod community in the Izu Ridge region off Japan. Zooplankton samples were collected at 0-200 m using NORPAC net, and both DNA and RNA were... -
marine metagenome Targeted loci
This project aimed to characterize the environmental community structure in the tropical Indian and Pacific Oceans. The metabarcoding data of 18S V9 region were obtained from... -
Arctic Ocean 18S raw sequencing reads
18S metabarcoding of Arctic Ocean (Canada Basin/Beaufort Sea) surface water samples to examine microbial eukaryote community structure and diversity. -
QUANTIFYING THE DIVERSITY AND ACTIVITY OF MICROBES CATALYZING PARTICLE DECOMP...
Identifying the various microorganisms on sinking particles and in water column at 175 m at Station ALOHA using 16S ribosomal (rRNA) sequencing. -
nifH diversity in the North Pacific Ocean
This study was performed to elucidate community structure of nitrogen fixing bacteria in the North Pacific Ocean -
cold water coral
microbiome of cold-water corals -
nifH diversity in the Arctic Ocean
This study was performed to elucidate community structure of nitrogen fixing bacteria in the Arctic Ocean. -
Diet analysis of Pacific Bluefin Tuna larvae
Metagenetic analysis on gut contents of Pacific Bluefin Tuna larvae and planktons in environmental water -
Pleuromamma abdominalis MIG-seq and ddRAD-seq
Specie complex with multiple genetic clades is frequently observed using mitochondrial makers in pelagic copepods. However, reproductive isolation among clades is not fully... -
Southern Ocean prokaryotes (SCALE)
This project was part of SCALE (Southern oCean seAsonaL Experiment). Our objective was to study distribution and potential functionality of prokaryotes in the Southern Ocean -
Isolation of SAR11 marine bacteria from cryopreserved seawater
Investigation of the use of cryopreserved seawater for isolation of marine bacteria. -
oceanic Metagenome
This project explores genomic capabilities of microbial eukaryotes from the temperate Eastern Pacific. There are four samples along a physico-chemical gradient: coastal surface,... -
Metabarcoding analysis of size-fractioned copepods in the Kuroshio region off...
This project aimed to characterize community structure and diversity of small copepods in the Kuroshio region off Japan. The metabarcoding data of 28S D2 region were obtained... -
Ocean Targeted Locus (Loci)
The cyanobacteria Prochlorococcus and Synechococcus are important marine primary producers. We explored their distributions and co-variance along a physico-chemical gradient... -
18S rRNA gene of plankton samples around Kerguelen
These sequences provide an overview of the diversity of unicellular eukaryotes in surface waters on- and off the Kerguelen Plateau.