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Alpha-1 antitrypsin deficiency gut microbiome
This dataset contains 16S rRNA Illumina MiSeq sequenced samples used in our gut microbiome study in individuals with alpha-1 antitrypsin deficiency (AATD) and controls... -
Impacts of Nutrient Enrichment on Oyster Gut and Shell Microbiomes
As keystone species in the coastal environment, oysters play a crucial role in nitrogen cycling, improving water quality for other marine organisms and humans. It is understood... -
The effect of captivity on the microbiome of spotted eagle rays (Aetobatus na...
Comparison of the microbiome from different body sites of captive and wild spotted eagle rays, and captive cow-nose rays. The samples include swabs collected from the cloaca,... -
DOORS seawater sampling (using EMO BON protocols)
In the framework of the "Developing Optimal and Open Research Support for the Black Sea (DOORS)" project (Horizon 2020 Grant agreement ID: 101000518), sampling was conducted in... -
Microbial Community of marine subsurface rocks
International Ocean Discovery Program (IODP) Expedition 357 successfully cored an east-west transect across the southern wall of Atlantis Massif on the western flank of the... -
16S rRNA gene profiling of the biofilm communities of plastics across differe...
This study aimed at understanding whether a core plastic biofilm community exists, and whether it is related to plastic degraders. -
Environmental availability of Lucinid symbionts
Loripes orbiculatus, a member of the species-rich chemosymbiotic bivalve family Lucinidae, can be found throughout the Mediterranean and has a well-studied... -
Microbial diversity of Oncholaimus sp
Caracteristic of microbiome of a nematode Oncholaimus sp. from the gulf of Naples -
Microbial life in the shallow rocky subsurface at Atlantis Massif
This project sought to study the microbial life inhabiting rocks of lithologies recovered from Atlantis Massif during the International Ocean Discovery Program (IODP) Expedition... -
Organic Matter Usage by Marine Thaumarchaeota
We investigated the ability of a natural and diverse population of MGI to assimilate organic substrates using metagenomics,metatranscriptomics, and fluorescence in situ... -
A whole-watershed microbiome reveals a cross-biome role in symbiont sources a...
In this study we map microbial distributions within a small, natural watershed in order to examine source-sink dynamics of symbiotic microbes at the landscape scale, among... -
Habitat conditions reflect compositional differences in microbiome among Cari...
Sea urchins are considered one of the most common benthic grazers in tropical marine ecosystems and can exert a strong in??uence in the community structure. The sea urchins... -
shenzhen bay illumina metagenomic sequencing Metagenome Metagenome
Using illumina platform to identify ARGs and ARBs in shenzhen bay seawater samples -
Microbial and viral dispersal along the natural water cycle
In this study we aim to explore the dispersal of viruses and microbes from the air-sea interface to aerosols and rain. -
Coral and reef habitat Symbiodiniaceae
Survey of Symbiodiniaceae communities based on ITS2 in coral tissue and mucus and surrounding environmental niches (sediments, seawater, turf algae mats). -
Structural shifts in sea ice prokaryotic communities across a salinity gradie...
The Hudson Bay is an iconic cryo-environment that marks the ecological transition between Canadian Subarctic and Arctic biomes. Although the Hudson Bay has been subjected to... -
Larval fish diet and zooplankton metabarcoding
Dietary DNA from the larval stages of two fishes, longfin smelt (Spirinchus thaleichthys) and Pacific herring (Clupea palasii) was sequenced targeting the mitochondrial... -
Olympia Oyster Microbiome
Olympia Oyster (Ostrea lurida) populations rapidly declined in Washington over a century ago. Currently, there are efforts by the state of Washington DNR to monitor Ostrea... -
The bacterial communities on surface water plastics and filtered surface wate...
Between May and July of 2019, the German research vessel SONNE traversed the North Pacific Ocean from Vancouver to Singapore. Surface plastic particles were collected along this...
