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Assorted bacteria with public health implications
Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics.... -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to... -
Campylobacter from wild bird species
WGS of a collection of Campylobacter isolates from wild birds Genome sequencing and assembly -
Capra hircus Genome sequencing and assembly
We present a description of draft genomes (MAGs) in the rumen of goat kids at 1, 7, 14, 28, 42, 56, 70 and 84 days of age -
Evaluating Nanopore-based bacterial variant calling
Benchmark various nanopore-based variant callers on 14 different species. Samples are sequenced on the latest (September 2023) R10.4.1 Nanopore flowcells and Illumina. Ground... -
Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support... -
BactID
Bacterial identification run in house at UCLA -
Whole Genome Sequencing of Foodborne Pathogens
Five foodborne pathogens were sequenced using the iSeq100, MiSeq, and MinION. Each set of reads was assembled independently and in combination to compare genome assembly quality... -
GenomeTrakr WGS Validation Strain Set
This BioProject hosts genome sequence data for the FDA GenomeTrakr's validation strain set, which includes 32 bacterial species of foodborne pathogens and common contaminants.... -
Capra hircus Genome sequencing and assembly
417 metagenome-assembled genome identified in the rumen of goat kids from one to 84 days of age
