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Benchmark test for RAGE-Seq based on mock community of four species
Benchmark test for RAGE-Seq based on mock community of four species -
Pervasive, coordinated protein level changes driven by transcript isoform swi...
To better understand the gene regulatory mechanisms that program developmental processes, we carried out simultaneous, genome-wide measurements of mRNA, translation and protein... -
Saccharomyces cerevisiae yHRWh93 hybrid Resequencing
Genome sequencing of Saccharomyces hybrid strain -
A cell non-autonomous mechanism of yeast chronological aging regulated by cal...
Purpose: To gain additional insights to candidate factors promoting longevity in Caloric Restricted Conditioned Media (CRCM), we performed transcriptomics analysis (RNA-seq) on... -
The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Diso...
Peroxisomal Biogenesis Disorders (PBDs) are genetic disorders of peroxisome biogenesis and metabolism that are characterized by profound developmental and neurological... -
Transcriptome Profile of Quantum Dots on Saccharomyces cerevisiae
Transcriptome Profile of CdSe/ZnS and InP/ZnS Quantum Dots on Saccharomyces cerevisiae Overall design: Exposure of InP/ZnS quantum dots at 100 µg/mL on Saccaromyces cerevisiae... -
Gene expression profile at single cell level yeast cells under stress
To understand transcriptomic changes in baker’s yeast S. cerevisiae cells under stress conditions, we sequenced 117 yeast cells under three stress treatments (hypotonic... -
RNA-sequencing results of five samples across three YMC cycles of both wt and...
The goal of the experiments is to study how the absence of Yaf9-H3 acyl reading affected metabolic and global gene transcription. We performed RNA-seq for our wt and yaf9W89A... -
High level and nature of transcriptional noise in yeast cells [5'-Seq]
“Biological noise” is defined as functionally insignificant events that occur in living cells due to imperfect fidelity of biological processes. Distinguishing between... -
Ancient balancing selection maintains incompatible versions of a conserved me...
Accumulation of genetic incompatibilities can lead to speciation, but there are few detailed examples of this process in action. We discovered that the classical galactose... -
UMR SPO : Plan de Gestion des Données (structure)
Plan de Gestion des Données structure de l'UMR SPO -
Data from "QTL mapping reveals novel genes and mechanisms underlying variatio...
This data set has been for the detection of QTLs involved in H2S production during alcoholic fermentation. A Bulk segregant analysis strategy has been retained, and genotypic... -
Temporal segregation of biosynthetic processes is responsible for metabolic o...
The ZIP files contain analysis files (Python) for the figures, as well as files for the two used models, i.e. the cell mass model and the FBA model. The analysis is described in... -
Dataset Figure_2: Determination of nuclear Whi5 concentration by widefield fl...
This dataset contain the data used to determine the nuclear to whole-cell volume for the Nup133-yeGFP strain. -
Dataset Figure_1: Determination of Whi5 concentration with widefield fluoresc...
This dataset contains all data and scripts used to generate figure 1, "Determination of Whi5 concentration with widefield fluorescence microscopy may be confounded by... -
Dataset Figure_6: Cln3 levels pulse prior to Start
Data and Matlab script 1. FLmean_Cln3_GLU: CSV file containing mean GFP concentration from Cln3-P2A-GFP for single daughter cells grown in glucose. Each cell is followed from... -
Dataset Figure_4: Nuclear Whi5-GFP intensity versus time from repeated imagin...
Whi5-GFP intensity as a function of time for the same FOVs. Only small daughter cells in the asynchronous population at time point 0 were quantified as a function of time. The... -
Dataset Figure_5: Whi5-GFP intensity versus size and time in a synchronous G1...
Whi5-GFP intensity as a function of time for the different FOV of elutriated cells. This dataset contains: 1. Raw TIF_images_NADH – These are autofluorescence images taken at...