Single-cell RNA-sequencing Analysis Reveals the Dynamic Immune Cell Landscape and Cellular Immune Responses in Bony Fish

We used 10X scRNA-Seq to investigate gene expression dynamics and cell type changes in four turbot immuno-organs (gill, head kidney, posterior intestine and spleen) during infection. In total, 103,055 high quality leukocytes were characterized. Our results not only provide a useful resource for the study of fish immune system, but also uncover the origins of adaptive immunity throughout vertebrate evolution. Overall design: Single-cell transcriptome dynamics of turbots during Edwardsilella piscicida EIB202 infection.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012C2D2954A131792EEDA497B1CF3E3DD5E6EF426B1
Metadata Access https://data.blue-cloud.org/api/collections/C2D2954A131792EEDA497B1CF3E3DD5E6EF426B1
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Ahua lab, East China University of Science and Technology
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Coverage Begin 2023-11-08T00:00:00Z
Temporal Coverage End 2023-11-11T00:00:00Z