Processed micro-tomographic scan of the ant Temnothorax arimensis, scanned at KIT Light Source. This dataset is part of the open-source digitization project ‘Antscan’, with a database consisting of thousands of scanned ethanol-preserved ant samples from museums and personal collections worldwide.

Ant Specimen

Tomographic data acquisition

Reconstruction of absorption and phase contrast 32-bit tomograms

Blending of both reconstructions

8-bit conversion

Stitching of height steps

Cropping

specimen_code = OKENT0105445, collection_code = OK05549, taxon_code = Temnothorax.arimensis, lifestagesex_original_col = aQ, subcaste_original_col = not_available, caste = queen, caste_detail = alate, genome_associated = not_available, LTS_Box = Okinawa_LTS_6, for_more_specimen = not_available, specimens_left = not_available, scanning_vial_box = ANTSCAN_XS_27, problems_det = not_available, problems_other = not_available, stained = unstained, scan_tray = tray_27, magnification = 5x_2steps, voxel_size = 2.44 µm, filter = 500 µm Al, projections = 3000, fps = 70.0, exposure_time_per_frame = 0.01 s, Genus = Temnothorax, Species = arimensis, Status = valid, Name = Temnothorax arimensis, Family_or_other = Formicidae, Subfamily = Myrmicinae, Tribe = Crematogastrini, Genus_authority = Mayr, 1861, Source = https://www.antwiki.org/wiki/Temnothorax, specimen_id = 44514.0, located_at = OIST, owned_by = not_available, antscan_contributor = Evan P. Economo, determined_by = M. Yoshimura, insert_user_23 = fumika, collected_by = Masashi Yoshimura, method = Colony sampling, sampling_effort = not_available, date_collected_start = not_available, date_collected_end = not_available, habitat = not_available, microhabitat = not_available, behavior = not_available, disturbance_level = not_available, country = Japan, adm1 = Hokkaido, adm2 = Rishirifuji, island_group = not_available, island = Rishiri Is., locality_name = Dottomari, latitude = 45.229722, longitude = 141.253333, latlong_error = not_available, elevation = 110.0, elevation_error = not_available, biogeographic_region = not_available