Replication Data for: Fluorescent substrates enables specific detection and structure-function insights into human aldehyde dehydrogenase isoforms

DOI

The dataset refers to a single manuscript in which three different fluorescent substrates were used to assess the enzymatic activity of purified ALDH isoforms and their application to detect ALDH in low-activity cell extracts. Raw data corresponding to Tables 1, 2, and 3, Figures 5 and 6, and supplementary data Figure S3.

GraFit, 5.0

GraphPad Prism, 8.4.4

Instruments, calibration and standards information - Cary Eclipse Fluorescence spectrometer (Agilent). 5 ?M NADH/ NADPH was used as an internal Standard. The absorbance spectrum of BAAA was obtained using a Cary 400 Varian UV–Visible spectrophotometer. The molar extinction coefficient was calculated from the linear plot of absorbance versus known concentrations of the compound, resulting in ?506 =33.2 ×103 M-1·cm-1. This allowed us to determine the precise substrate concentration prior to each experiment from the absorbance measurement in commercial Assay Buffer. A Cary 400 Varian UV–vis spectrophotometer was used to determine the absorbance spectra of MONAL-62, 6-methoxy-2-naphthoic acid (MONOIC-62), MONAL-71, 7-methoxy-1-naphthoic acid (MONOIC-71) and NADH in water:acetonitrile (60:40, v/v) for MONAL series of compounds and 50 mM HEPES, pH 8.0, for NADH. Precise substrate concentration was assessed from molar extinction coefficients for MONAL-62, ?316 =14.2 ×103 M-1·cm-1, and MONAL-71, ?352 =6.1 ×103 M-1·cm-1. Environmental or experimental conditions - 25ºC for BAAA and 37ºC for MONAL compounds. Quality-assurance procedures performed on the data - Data are presented as the mean ± standard deviation from duplicate measurements and the kinetic parameters are shown as the mean ± standard error.

Identifier
DOI https://doi.org/10.34810/data2556
Related Identifier IsSupplementTo https://doi.org/10.1016/j.cbi.2025.111609
Metadata Access https://dataverse.csuc.cat/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34810/data2556
Provenance
Creator Farrés, Jaume ORCID logo; Pequerul Pavón, Raquel (ORCID: 0000-0002-0008-975X)
Publisher CORA.Repositori de Dades de Recerca
Contributor Farrés Vicén, Jaume; Universitat Autònoma Barcelona
Publication Year 2025
Funding Reference https://ror.org/003x0zc53 PID2020-119424RB-I00 ; https://ror.org/003x0zc53 PID2023-150696NB-I00
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact Farrés Vicén, Jaume (Universitat Autònoma de Barcelona)
Representation
Resource Type Experimental data; Dataset
Format text/tab-separated-values; text/plain
Size 3863; 6113
Version 1.0
Discipline Life Sciences; Medicine