Supplementary Data to: "Cysteine-mediated structural stabilization of the tetrameric GlpF"

DOI

Simulation files, molecular structures and trajectories tetrameric GlpF wild type and M4C mutant. in the latter, 4 cysteine residues in the transmembrane helix bundle of GlpF, in detail C11, C28, C80, and C99 are replaced by glycines. The data underlays our publication on the role of those 4 cysteine residues for stability of membrane inserted tetrameric GlpF in a simple 3-component membrane mimic of E. coli polar lipid extract (PLE).

The zips include: 1. the charmm36-july2017.ff simulation directory for GROMACS 202X 2. gromacs simulation files (topologies and mdp files) 3. snapshots of first and last (3µs) frames of two replica of the simulations including all atoms in the simulation systems 4. protein trajectories saved every 100 ps 5. protein pdb files every 100 ns

Identifier
DOI https://doi.org/10.18419/DARUS-5324
Metadata Access https://darus.uni-stuttgart.de/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.18419/DARUS-5324
Provenance
Creator Pluhackova, Kristyna ORCID logo
Publisher DaRUS
Contributor Pluhackova, Kristyna
Publication Year 2025
Funding Reference DFG EXC 2075 - 390740016 ; DFG 440719683 ; Erlangen National High Performance Computing Center MoTrNanoMat ; Ministry of Science, Research and the Arts Baden-Württemberg and by the Federal Ministry of Education and Research BwForCluster BiNAC
Rights CC BY 4.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/licenses/by/4.0
OpenAccess true
Contact Pluhackova, Kristyna (University of Stuttgart)
Representation
Resource Type Dataset
Format application/x-gzip
Size 616965; 3620846359; 3641845084
Version 1.0
Discipline Chemistry; Life Sciences; Medicine; Natural Sciences; Physics