Whole_genome_sequencing_of_a_collection_of_Vibrio_cholerae_isolates_from_cholera_patients_and_aquatic_environments_in_Bangladesh

We propose to conduct whole genome sequencing of 100 diverse Vibrio cholerae isolates including pathogenic and nonpathogenic strains belonging to O1, O139 and non-O1/O139 serogroups to understand the evolution of this important pathogen. Toxigenic V. cholerae normally exists in an aquatic ecosystem, but infects humans to cause devastating epidemics of cholera that causes 120,000 deaths and about 3.5 million cases worldwide every year. We seek to analyze strains isolated from both cholera patients and the aquatic environment in Bangladesh, where seasonal epidemics of cholera occur every year.This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

Identifier
Source https://data.blue-cloud.org/search-details?step=~0126AF8CBB7AB405B4F9D97D174A4267B3B7FC9D5BB
Metadata Access https://data.blue-cloud.org/api/collections/6AF8CBB7AB405B4F9D97D174A4267B3B7FC9D5BB
Provenance
Instrument Illumina HiSeq 2500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2025
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2018-06-12T00:00:00Z