Capture of activated dioxygen intermediates at the copper-active site of a lytic polysaccharide monooxygenase

DOI

Molecular dynamics (MD) trajectories for lytic polysaccharide monooxygenases (LPMO) based on neutron structure. These simulations were performed using AMBER package (ff14SB force-field) with explicit solvent and counter-ions. The durations of each trajectory is 1 microsecond. 1,000 snapshots each separated by 1 nanosecond are provided here in PDB format. The water molecules and counter-ions have been removed from these PDB frames. These files can be viewed using a biomolecular visualization software, such as PyMOL.

Date Submitted: 2022-06-07

Identifier
DOI https://doi.org/10.17026/dans-zkr-pyrc
Metadata Access https://lifesciences.datastations.nl/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.17026/dans-zkr-pyrc
Provenance
Creator PRATUL Agarwal ORCID logo
Publisher DANS Data Station Life Sciences
Contributor Pratul Agarwal
Publication Year 2022
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact Pratul Agarwal (Oklahoma State University)
Representation
Resource Type Dataset
Format application/zip; application/vnd.palm
Size 10939; 269616971; 261516971
Version 1.0
Discipline Life Sciences; Medicine