HiViTAlign Organ Tissue Puzzle Dataset

DOI

The dataset contains two folders: 'originals_thumbnails' and 'masked'. The 'originals_thumbnails' folder contains thumbnails of 192 Whole Slide Images (WSI) with a resolution > 1000 pixel for the shorter edge. The 'masked' folder contains processed images from the first folder applying masking for tissue detection. These images are square shaped with a size of 1024x1024 pixels.

Identifier
DOI https://doi.org/10.11588/DATA/8FYQKA
Related Identifier IsSupplementTo https://doi.org/10.1101/2025.07.14.664649
Metadata Access https://heidata.uni-heidelberg.de/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.11588/DATA/8FYQKA
Provenance
Creator Blattgerste, Christoph ORCID logo
Publisher heiDATA
Contributor Blattgerste, Christoph; Prof. Dr. med. Cleo-Aron Weis; Dr. med. vet. Tanja Poth; Dr. med. Constantin Schwab
Publication Year 2026
Funding Reference State Parliament of Baden-Württemberg Innovation Campus Health + Life Science alliance Heidelberg Mannheim
Rights CC BY 4.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/licenses/by/4.0
OpenAccess true
Contact Blattgerste, Christoph (Heidelberg University, Institute of Pathology, Section Computational Pathology)
Representation
Resource Type PNG images; Dataset
Format application/zip; text/plain
Size 134908175; 992820439; 2813
Version 1.0
Discipline Life Sciences; Medicine
Spatial Coverage Center for Model System and Comparative Pathology (CMCP), Institute of Pathology, University hospital Heidelberg