WikiPathways

DOI

WikiPathways is a continuously updated, and machine readable database of biological pathways. These pathways describe which genes, protein, and metabolites interact with each other to give rise to a biological process. Using identifiers for these three biological entities, links to other life sciences data bases are made (Uniprot, NCBI, Ensembl, HMDB, etc). It also allows mapping experimental omics data to be visualized on top of these pathways. From the WikiPathways Website all data is available under a Creative Commons Attribution license. This current dataset is a release created on the basis of the pathways from November 11, 2015.

Date Submitted: 2016-05-29

Files not yet migrated to Data Station. Files for this dataset can be found at https://easy.dans.knaw.nl/ui/datasets/id/easy-dataset:64849.

The readme is in Dutch

Identifier
DOI https://doi.org/10.17026/dans-zkq-kanf
Metadata Access https://lifesciences.datastations.nl/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.17026/dans-zkq-kanf
Provenance
Creator The WikiPathways Project
Publisher DANS Data Station Life Sciences
Contributor E.L. Willighagen; T. Kelder (EdgeLeap); A. Pico (Gladstone Institutes); M. van Iersel (General Bioinformatics); K. Hanspers; B. Conklin (Gladstone Institutes); C. Evelo (Maastricht University); M. Kutmon (Maastricht University); A. Riutta (Gladstone Institutes); A. Bohler (Maastricht University); E. Willighagen (Maastricht University); E. Cirillo (Maastricht University); J. Melius (Maastricht University); N. Nunes (Maastricht University); R. Miller (Maastricht University); S. Steinbusch-Coort (Maastricht University); A. Waagmeester (Micelio); C. Bansal; L. Pradhana; S. Sinah; T. Alexandr; Funding Agency: Open PHACTS - IMI grant; Funding Agency: eNanoMapper - EC FP7 grant 604134; Funding Agency: IOP Gut Health; Funding Agency: EU network of Excellence NuGO - EC FP6 grant 506360; Funding Agency: EU Irses project MicroGennet - EU Marie Curie action program IRSES grant 269210
Publication Year 2016
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact E.L. Willighagen (Maastricht University)
Representation
Resource Type Dataset
Format application/zip
Size 30729
Version 1.0
Discipline Life Sciences; Medicine