Replication Data for: The long 5′ UTR of nrdAB modulates mRNA levels, stability, and virulence in Pseudomonas aeruginosa PAO1

DOI

The class Ia ribonucleotide reductase (RNR), encoded by the nrdAB operon in Pseudomonas aeruginosa, has a long 5’ untranslated region (5’ UTR) whose regulatory role remains poorly understood. In this study, we investigated the functional significance of the nrdAB 5’ UTR using a comprehensive set of bioinformatic and experimental approaches, including gene expression profiling, relative protein levels, and in vivo infection assays in the Galleria mellonella animal model. Our results demonstrate that the 5’ UTR negatively regulates nrdA expression by reducing transcript levels, decreasing mRNA stability and limiting protein abundance. Truncation of this region led to increased expression, particularly during stationary phase, suggesting a regulatory mechanism that fine-tunes RNR activity when dNTP synthesis is no longer required. In vivo, the Δ5’ UTR mutant exhibited reduced virulence compared to the wild-type strain, accompanied by elevated nrdA mRNA levels and a modest decrease in nrdJ expression. While these changes may contribute to alter RNR regulation during infection, they are unlikely to fully explain the observed phenotype, indicating that additional factors may be involved. Although no specific regulatory elements within or acting upon the 5’ UTR were probed under the tested conditions, the possibility of such mechanisms cannot be excluded, and further studies will be needed to elucidate the underlying molecular mechanisms. Overall, our findings demonstrate that the 5’ UTR plays a regulatory role in modulating nrdAB operon expression and contributes to maintaining RNR system homeostasis in P. aeruginosa

Identifier
DOI https://doi.org/10.34810/DATA2361
Related Identifier IsSupplementTo https://doi.org/10.1038/s41598-025-20079-6
Metadata Access https://dataverse.csuc.cat/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34810/DATA2361
Provenance
Creator Martínez Mateos, Ángela ORCID logo; Rubio-Canalejas, Alba ORCID logo; Pedraz, Lucas ORCID logo; Torrents, Eduard ORCID logo
Publisher CORA.Repositori de Dades de Recerca
Contributor Martínez Mateos, Ángela; Institut de Bioenginyeria de Catalunya
Publication Year 2025
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact Martínez Mateos, Ángela (Institut de Bioenginyeria de Catalunya (IBEC))
Representation
Resource Type Experimental data; Dataset
Format text/plain; image/jpeg; text/tab-separated-values; image/tiff
Size 11451; 2145601; 2441371; 25549; 2918418; 649; 379; 291; 1837; 65; 3898; 1027111
Version 4.1
Discipline Life Sciences; Medicine