Data for "Aromatic Ring Flips Reveal Reshaping of Protein Dynamics in Crystals and Complexes"

DOI

Protein conformational energy landscapes are shaped not only by intramolecular interactions but also by their environment. In protein crystals and protein-protein complexes, intermolecular contacts alter this energy landscape, but the exact nature of this alteration is difficult to decipher. Understanding how the crystal lattice affects protein dynamics is crucial for crystallography-based studies of motion, yet its influence on collective motions remains unclear. Aromatic ring flips in the hydrophobic core represent sensitive probes of such dynamics. Here, we compare the kinetics of aromatic ring flips in the protein GB1 in crystals, in complex with its binding partner IgG, and in solution, combining advanced isotope labeling with quantitative NMR methods. We show that rings in the core flip nearly a thousand times less frequently in crystals than in solution. Enhanced-sampling molecular dynamics simulations, based on a new crystal structure, reproduce these elevated barriers and reveal how the crystal restrains motions.

Identifier
DOI https://doi.org/10.15479/AT-ISTA-20641
Metadata Access https://research-explorer.app.ist.ac.at/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai:pub.research-explorer.ista.ac.at:20641
Provenance
Creator Becker, Lea Marie ; ORCID logo; Schanda, Paul ; ORCID logo
Publisher Institute of Science and Technology Austria
Publication Year 2025
Rights info:eu-repo/semantics/openAccess
OpenAccess true
Contact repository.manager(at)ist.ac.at
Representation
Resource Type info:eu-repo/semantics/other; doc-type:ResearchData; Text
Discipline Life Sciences, Natural Sciences, Engineering Sciences