Hand-labeled ground truth images of ice thick section microphotographs of the EDML ice core to evaluate air hydrate segmentation performance

DOI

In the deeper part of polar ice sheets, air hydrates are the primary air inclusions. They trap most of the ancient air molecules used for paleoclimatic reconstructions in their crystal structure. Furthermore, their number and size was found to correlate with past climate. Microphotographs of ice thick sections of the EPICA Dronning Maud Land (EDML) ice core were obtained in the years 2002 - 2006 during the Antarctic field season, shortly after the sample was drilled, using an optical microscope (Kipfstuhl et al., 2006; Kipfstuhl, 2007). This dataset presents eight ground truth (GT) images with the dimensions of 20 x 10 mm together with masks of hand-labeled air hydrates differentiated into five visual categories. The visual categories are: Above focus (AF), In focus, Below focus (BF), Far out of focus (FOF) and air hydrates that can hardly be distinguished from other image artifacts (X).

A GT-set includes the following images (example for 1285.01C):- 1285.01C_GT_crop: The cropped microphotograph of sample 1285.01C.- 1285.01C_segmented: The automatically segmented microphotograph.- all_labels_1285: Masks of hand-labeled air hydrates including all visual categories.- AF_1285, focus_1285, BF_1285, FOF_1285, X_1285: Masks including air hydrates of only one visual category.The images were labeled and analyzed by Florian Painer at the Alfred Wegener Institute, Bremerhaven and the analysis routines were implemented in Python using open-source libraries. The aim was to develop a semi-automated analysis routine and to provide a high-resolution record of air hydrate properties of the EDML ice core.

Identifier
DOI https://doi.pangaea.de/10.1594/PANGAEA.984842
Related Identifier References https://doi.org/10.1594/PANGAEA.663141
Related Identifier References https://doi.pangaea.de/10.1594/PANGAEA.984852
Related Identifier References https://doi.org/10.3189/172756506781828647
Related Identifier References https://doi.org/10.5194/egusphere-2025-633
Related Identifier References https://doi.org/10.5281/ZENODO.16738522
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.984842
Provenance
Creator Painer, Florian; Weikusat, Ilka ORCID logo; Kipfstuhl, Sepp ORCID logo
Publisher PANGAEA
Publication Year 2025
Funding Reference Fifth Framework Programme https://doi.org/10.13039/100011104 Crossref Funder ID EVK2-CT-2000-00077 https://cordis.europa.eu/project/id/EVK2-CT-2000-00077 European Project for Ice Coring in Antarctica; Fourth Framework Programme https://doi.org/10.13039/100011105 Crossref Funder ID ENV4980702 https://cordis.europa.eu/project/id/ENV4980702 European Project for Ice Coring in Antarctica; Horizon 2020 https://doi.org/10.13039/501100007601 Crossref Funder ID 955750 doi:10.3030/955750 Research and training network on understanding Deep icE corE Proxies to Infer past antarctiC climatE dynamics (DEEPICE)
Rights Creative Commons Attribution 4.0 International; Data access is restricted (moratorium, sensitive data, license constraints); https://creativecommons.org/licenses/by/4.0/
OpenAccess false
Representation
Resource Type Dataset
Format text/tab-separated-values
Size 32 data points
Discipline Earth System Research
Spatial Coverage (0.068 LON, -75.002 LAT)
Temporal Coverage Begin 2001-01-10T00:00:00Z
Temporal Coverage End 2006-01-17T00:00:00Z