Biopolymer degradation in Arctic surface sediments

Heterotrophic bacteria in the ocean initiate biopolymer degradation using extracellular enzymes that yield low molecular weight hydrolysis products in the environment, or by using a selfish uptake mechanism that retains the hydrolysate for the enzyme-producing cell. We obtained surface sediment samples obtained from Isfjorden, Svalbard, with four different fluorescently-labelled polysaccharides (FLA-PS, 100 µM monosaccharide-equivalent concentration laminarin, xylose, chondroitin sulfate, fucoidan) and the glycoprotein mucin over a time course of up to 17.5 days (for April series) and up to 10 days for September series. The bacterial community composition at t0 and the final time point (t5) were studied by 16S rRNA gene sequencing.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01264F8FE9911562C0E52EF47AAE544BBE757B29D6F
Metadata Access https://data.blue-cloud.org/api/collections/64F8FE9911562C0E52EF47AAE544BBE757B29D6F
Provenance
Instrument Illumina HiSeq 2500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (14.350W, 78.100S, 14.350E, 78.100N)
Temporal Coverage Begin 2019-04-25T00:00:00Z
Temporal Coverage End 2019-09-13T00:00:00Z