SPM Shape-PCA model

DOI

This dataset contains the parameters of a random orbit model, where the template represents the mean shape of a population and deviations from this mean shape are encoded by geodesics sampled from a multivariate Gaussian distribution.shape_pca_template_{01234}.nii contain the template with increasingly refined levels of details.shape_pca_subspace_scaled.nii contains a low-dimensional orthogonal subspace from which geodesic-encoding velocities are sampled.model_variables.mat contains variables A (100x100 matrix) - contains the covariance of the learned prior over latent variables; i.e., their distribution in the population.Az (100x100 matrix) - contains the posterior covariance over latent variables; i.e., the uncertainty about the true value of any latent code.lam - contains the precision (i.e., inverse of variance) of the residual noise not captured by the 100-dimensional subspace.ReferencesAshburner, J., Brudfors, M., Bronik, K. and Balbastre, Y., 2019. An algorithm for learning shape and appearance models without annotations. Medical image analysis, 55, pp.197-215.Balbastre, Y., Brudfors, M., Bronik, K. and Ashburner, J., 2018. Diffeomorphic brain shape modelling using Gauss-Newton optimisation. MICCAI 2018, pp. 862-870.

Identifier
DOI https://doi.org/10.5522/04/27144015.v1
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Metadata Access https://api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=oai:figshare.com:article/27144015
Provenance
Creator Balbastre, Yael; Ashburner, John; Barnes, Gareth
Publisher University College London UCL
Contributor Figshare
Publication Year 2024
Rights https://creativecommons.org/licenses/by/4.0/
OpenAccess true
Contact researchdatarepository(at)ucl.ac.uk
Representation
Language English
Resource Type Model; Other
Discipline Life Sciences; Medicine; Neurosciences