Data from an evolution experiment with Vibrio bacteria and filamentous phages

DOI

Infections by filamentous phages influence bacterial fitness in various ways. While phage-encoded accessory genes, e.g., virulence genes, can be highly beneficial, the production of viral particles is energetically costly and often reduces bacterial growth. Consequently, if costs outweigh benefits, bacteria evolve resistance which can shorten phage epidemics. Abiotic conditions are known to influence the net-fitness effect for infected bacteria. Their impact on the dynamics and trajectories of host resistance evolution, however, remains yet unknown.Combining experimental evolution, genomics, and mathematical modelling we show that phage epidemics are prolonged in sub-optimal environmental conditions, which reduce bacterial growth rate. The data set comprises populations dynamics data, including bacterial and phage density as well as evolutionary dynamics data, e.g. measured resistance of bacteria against the ancestral phage as well as the proportion of phage-infected clones in bacterial populations. Furthermore, growth data and phage production of individual clones are provided.At reduced salinity, bacteria carrying the co-evolving phage remained twice as long in the bacterial population before being outcompeted by phage-resistant mutants. Our deterministic model suggests that the delayed presence of phage-infected clones and resistance evolution is driven by a lower bacterial growth rate at 7 PSU, which in turn reduces the encounter rate of phage and bacteria. Reduced absolute growth rates at low salinity and relaxed costs of phage carriage (i.e. reduced phage production) result in a prolonged presence of phage infected bacterial clones. These results suggest that environmental parameters, which reduce the costs of carrying a filamentous phage might increase the prevalence of filamentous phages in bacterial populations, even if they do not carry any known accessory genes.

Identifier
DOI https://doi.pangaea.de/10.1594/PANGAEA.936135
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.936135
Provenance
Creator Goehlich, Henry ORCID logo; Roth, Olivia; Sieber, Michael; Chibani, Cynthia Maria ORCID logo; Poehlein, Anja; Rajkov, Jelena; Wagner, Kim-Sara ORCID logo; Liesegang, Heiko ORCID logo; Wendling, Carolin Charlotte ORCID logo
Publisher PANGAEA
Publication Year 2024
Funding Reference Deutsche Forschungsgemeinschaft, Bonn https://doi.org/10.13039/501100001659 Crossref Funder ID RO4628/3-1 ; Deutsche Forschungsgemeinschaft, Bonn https://doi.org/10.13039/501100001659 Crossref Funder ID WE 5822/1-1 SPP1819SPP1819 Rapid Evolution; European Research Council https://doi.org/10.13039/501100000781 Crossref Funder ID 755659 ERC
Rights Creative Commons Attribution 4.0 International; Data access is restricted (moratorium, sensitive data, license constraints); https://creativecommons.org/licenses/by/4.0/
OpenAccess false
Representation
Resource Type Dataset
Format text/tab-separated-values
Size 4 data points
Discipline Earth System Research