Main Spectra Profiles (MSP) compatibles with the Brucker MS system for identification of plant-pathogenic bacteria

DOI

Description: In this folder, are stored the individual main spectra profiles (MSP) produced in the framework of the Euphresco project 2018-A-271 ‘Rapid identification of plant-health related bacteria by MALDI-TOF mass spectrometry (MALD-ID)’

The list of MSP is available in the file “List MSP Mald-ID project-Plant pathogenic bacteria.xlsx” present in this folder. They are classified following the genera of the strain used for creating them. Note that Duffyella spp. MSPs are classified with the Erwinia spp. MSPs

These MSPs can be included in the built-in program of the Brucker MS system, permitting the analysis of spectra along with the spectra already provided by Brucker.

Rights: These MSPs are available, under licence CC BY-NC-SA. In particular, this licence allows you to remix, adapt, and build upon this reference collection for your work non-commercially, as long as you credit this data and license any new reference collection build upon this data under identical terms. No reference file from this work must be marketed as such or included in any form of commercially sold database but the authors expressly permit the application of the provided reference files for diagnostic purposes.

Format: The individual MSPs are on the format .btmsp Among the Erwinia MSPs, an additional file “Erwinia.btmsp” contains all the Erwinia MSPs as a single file.

Relation: These MSP are part of the EPPO standard: PM 7/ NEW Matrix assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of plant pathogenic bacteria

Source: These MSP are excerpted from: Euphresco project 2018-A-271 ‘Rapid identification of plant-health related bacteria by MALDI-TOF mass spectrometry (MALD-ID)’ available from https://drop.euphresco.net/search?title%5B%5D=euphresco+project+report

Identifier
DOI https://doi.org/10.57745/7OJNOO
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/7OJNOO
Provenance
Creator Portier, Perrine ORCID logo; Dutrieux, Cécile; Darrigo, Claire; Taghouti, Géraldine ORCID logo; Vannier, Léa; Amelon, Tatiana; van de Bilt, Jeroen; Epple, Susanne; Stindl, Kerstin; Wensing, Annette ORCID logo
Publisher Recherche Data Gouv
Contributor Portier, Perrine; Euphresco
Publication Year 2023
Funding Reference Euphresco 2018-A-271
Rights info:eu-repo/semantics/openAccess
OpenAccess true
Contact Portier, Perrine (INRAE)
Representation
Resource Type Dataset
Format application/pdf; application/vnd.openxmlformats-officedocument.wordprocessingml.document; application/zip
Size 135107; 17108; 3595672
Version 3.0
Discipline Agriculture, Forestry, Horticulture; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Life Sciences