Are abundant bacteria more active than rare bacteria in the Sargasso Sea?

The project will use a combination of pyrosequencing and QPCR approaches to examine rRNA:rDNA ratios, BrdU incorporating cells, and transcript types and amounts in the metatranscriptome of Sargasso Sea surface water. Pyrosequencing (454) avoids amplification and cloning artifacts and it is cost effective. Preliminary analyses indicate that the sequence length of 454 reads and the proposed number of sequences are ideal for addressing the questions raised here. The investigators will also use Micro-FISH to examine incorporation of thymidine, leucine, and PO4. Samples will be collected twice yearly during the spring phytoplankton bloom when heterotrophic bacterial production is lowest and during the peak of bacterial production in summer.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01226E036668C1C7BB435CDB2628FD4C4EA4FA10ADC
Metadata Access https://data.blue-cloud.org/api/collections/26E036668C1C7BB435CDB2628FD4C4EA4FA10ADC
Provenance
Instrument Illumina HiSeq 2500; PacBio RS; 454 GS FLX+; LS454; ILLUMINA; PACBIO_SMRT
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor University of Southern California
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-64.100W, 31.400S, -64.100E, 31.400N)