LyROI – nnU-Net-based Lymphoma Total Metabolic Tumor Volume Delineation

DOI

Collection of neural network models for metabolic tumor volume delineation in (Non-Hodgkin) lymphoma patients in FDG-PET/CT images. Intended to use within nnU-Net deep learning framework. Trained with a total of 1192 [18F]FDG-PET/CT scans from 716 patients with Non-Hodgkin lymphoma participating in the PETAL trial.

For installation and usage instructions, please visit https://github.com/hzdr-MedImaging/LyROI

Please cite nnU-Net and the respective paper when using LyROI.

 

List of available models:

LyROI_Orig.zip: regular U-Net
LyROI_ResM.zip: residual encoder U-Net (medium)
LyROI_ResL.zip: residual encoder U-Net (large)
Identifier
DOI https://doi.org/10.14278/rodare.4177
Related Identifier IsIdenticalTo https://www.hzdr.de/publications/Publ-42318
Related Identifier IsReferencedBy https://www.hzdr.de/publications/Publ-42236
Related Identifier IsSupplementTo https://github.com/hzdr-MedImaging/LyROI
Related Identifier IsPartOf https://doi.org/10.14278/rodare.4160
Related Identifier IsPartOf https://rodare.hzdr.de/communities/health
Related Identifier IsPartOf https://rodare.hzdr.de/communities/pet-center
Related Identifier IsPartOf https://rodare.hzdr.de/communities/rodare
Related Identifier IsPartOf https://rodare.hzdr.de/communities/zrt
Metadata Access https://rodare.hzdr.de/oai2d?verb=GetRecord&metadataPrefix=oai_datacite&identifier=oai:rodare.hzdr.de:4177
Provenance
Creator Nikulin, Pavel ORCID logo; Hoberück, Sebastian; Apostolova, Ivayla; Maus, Jens ORCID logo; Hüttmann, Andreas; Dührsen, Ulrich; Kroschinsky, Frank; Kotzerke, Jörg; von Bonin, Malte; Bundschuh, Ralph; Braune, Anja ORCID logo; Hofheinz, Frank ORCID logo
Publisher Rodare
Publication Year 2025
Rights Creative Commons Attribution Share Alike 4.0 International; Open Access; https://creativecommons.org/licenses/by-sa/4.0/legalcode; info:eu-repo/semantics/openAccess
OpenAccess true
Contact https://rodare.hzdr.de/support
Representation
Resource Type Software
Version 1.0.1
Discipline Life Sciences; Natural Sciences; Engineering Sciences