barcodingPTplants - Aromatic, medicinal, and condiment plant genome sequencing and assembly using short reads

The world market of aromatic, medicinal, and condiment plant (AMCP) production is constantly growing, with Portugal following the same trend. AMCPs have a big cross-sector effect impacting the pharma, cosmetic, and agri-food industries. Providing assurance to consumers and other stakeholders about the integrity, safety, authenticity, and quality of Portuguese AMCP-based products is of prime importance in adding value and trust to the national economy. DNA barcoding is a crucial method for identifying species in a wide panel of raw to strongly processed commodities, where accurate taxonomical adscription of correct names to DNA sequences is essential. This project aims to construct a reference collection curated by a national herbarium composed of all commercially relevant AMCPs from Portugal. From this reference collection, all relevant DNA barcode sequences will be obtained to allow species identification by molecular methods, while also contributing to the Barcode of Life project.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0125E76BF9DC9868822E458DE762561990F08949FDB
Metadata Access https://data.blue-cloud.org/api/collections/5E76BF9DC9868822E458DE762561990F08949FDB
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Genoscope;GSC
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-9.352W, 37.044S, -7.975E, 41.741N)
Temporal Coverage Begin 2019-03-13T00:00:00Z
Temporal Coverage End 2020-10-27T00:00:00Z