30 datasets found

We explored the long-term (1-year) dynamics of a bathypelagic community in the absence of external inputs of carbon. We sequenced the 16S gene from both the DNA and the cDNA...

Using Illumina sequencing of the 16S rRNA gene, here we studied bacterial communities from the Nicoya’s gulf (Costa Rica), a large tropical estuary characterized by high...

The present study is aimed at understanding the impact of heavy metal pollution on the diversity of heterotrophic bacteria associated with sediment from multiple locations of...

Analysis of 18S DNA in Tara Oceans Protists size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small and large cell sizes. The DNA...

Metatranscriptome sequencing from different depths to retain small and large cell size (Protists Organisms). The RNA was extracted and submitted to high throughput sequencing.

Diplonemids sequence data corresponding to the V9 loop of the 18S rDNA in 850 size-fractionnated plankton communities sampled at 123 location including samples from the...

The taxonomic and functional composition of the eastern oyster microbiome was profiled by amplicon sequencing targeting the V4 region of the 16S rRNA gene and shotgun...

We performed a transplant experiment to compare the growth, activity and changes in DOM quality in surface and bathypelagic (~2000m depth) waters inoculated with either surface...

Seawater from different depths was precipitaded then filtered to retain small particle sizes (Virus particles). The DNA was extracted and submitted to high throughput sequencing.

High-throughput sequencing for analysis of environmental microbial diversity has evolved vastly over the last decade. Currently the go-to method for planktonic microbial...

Metatranscriptome sequencing from different depths to retain small cell size (Bacteria Organisms). The RNA was extracted and submitted to high throughput sequencing.

Seawater was filtered from different depths to retain small and large cell sizes. The DNA was extracted and submitted to high throughput sequencing.

Analysis of 16S DNA in Tara Oceans Prokaryotes size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small cell sizes. The DNA was...

Disease is a significant issue to aquaculture, and bacterial infections are common, yet our understanding of how fish host microbiomes interact with the bacterial diversity in...

Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.

Experiments with cultured bacteria have shown that they display feast and famine strategies that allow them to grow upon pulses in resource availability, and enter a non-growth...

Project compared trawl and eDNA species diversity, seasonality, and relative abundance.

Invasive species are co-introduced with microbiota from their native range and also interact with microbiota found in the novel environment to which they are introduced. Host...

The germline genomic reads and assemblies of two spirotrich ciliate species, Strombidium cf. sulcatum and Halteria grandinella, along with the somatic genome for S. cf. sulcatum.

Analysis of 16S DNA in Tara Oceans Prokaryotes and Protists size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small and large...