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2018 Australia fish microbiome study
Atl salmon study ABSTRACT Successful rearing of fish in hatcheries is critical for conservation, recreational fishing, and commercial fishing through wild stock enhancements,... -
A simple microbiome in the European common cuttlefish, Sepia officinalis
The European common cuttlefish, Sepia officinalis, is used extensively in biological and biomedical research yet its microbiome remains poorly characterized. We analyzed the... -
Earth Microbiome Project Multi-omics (EMP500)
The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial... -
Fish microbiota 101: host traits, ecology, and environmental factors influenc...
Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that... -
Patterns of microbiome transition along salinity gradients, and importance fo...
We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of... -
The Sponge Microbiome Project
Marine sponges (phylum Porifera) are a diverse, phylogenetically deep-branching clade known for forming intimate partnerships with complex communities of microorganisms. To... -
Characterization of the intestinal microbiota of the sea cucumber Holothuria ...
High-throughput 16S rRNA gene sequencing has been used to identify the intestinal microbiota of many animal species, but that of marine invertebrate organisms remains largely... -
Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribe...
combined samples sequenced with primers modified for forward barcoding on the 515f site, extended to include V5 and improved ITS -
3D multi-omic profiling of an assemblage of Hawaiian corals
Samples were taken from species Porities lobata, Montipora capitata, Montipora flabellata and subjected to 16S sequencing for bacterial profiling and LC-MS/MS for metabolomic... -
Knight skin biogeography comparison
Knight_skin_biogeography - Comparison of skin samples from a rat (mammal), cyclostomid (fish), iguana (reptile), bull frog (amphibian) and a bird (pigeon) to determine if the... -
Genomic basis of differential aerosolization of bacteria and viruses in sea s...
Airborne bacteria and viruses have direct consequences for atmospheric processes and human health, but little is known about factors controlling their transfer from the ocean to... -
Microbial effects of livestock manure fertilization on freshwater aquaculture...
The majority of seafood is produced from farming, with most finfish coming from freshwater ponds. Across continents, aquaculture is growing fastest in Africa at 11.7 % annual... -
Song Colorado freshwater fish
Microbiota of slime and gut samples from different species of freshwater fish from the Colorado River. -
Knight_extraction_test
One plate of samples was extracted using several different extraction tools (new, faster) for comparison with the existing pipeline
