-
MICROBIAL DIVERSITY IN KOCHI TRANSECT
The objective of the study is to explore the microbial diversity at different depths of Arabian Sea Oxygen Minimum Zone (AS-OMZ). Oxygen Minimum Zone (OMZ) is the zone in which... -
Probe capture enrichment sequencing of amoA gene
Ammonia monooxygenase subunit A (amoA) gene have been widely used for investigating phylogenetic diversity and spatial distribution of ammonia-oxidizing archaeal (AOA) and... -
Arctic microbiome along Svalbard Cross Shelf transects (2020 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects (Kongsfjorden), at different depths, based on V4-V5 16S rRNA gene amplicon... -
16S rDNA amplicon of Bacteria and Archaea Metagenome
16S rDNA sequencing of Bacteria and Archaea in the NW Mediterranean sea (transect from coast to open ocean and vertical profiles) -
Metaepigenomic anaysis of pelagic microbial communities
In this study, we conducted metaepigenomic analysis using microbial samples collected from four different depth layers at the North-West Pacific Ocean. -
Arctic microbiome along Svalbard Cross Shelf transects (2019 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects, at different depths and replicated for three distinct sequencing strategies:... -
Microbial Metatranscriptome from Lagrangian time series in North Pacific Subt...
Lagrangian sampling of surface water (23m) microbial populations in the North Pacific Subtropical Gyre for RNA analysis using the Environmental Sample Processor (ESP).... -
Single-cell view of deep-sea microbial activity and intracommunity heterogeneity
Microbial activity in the deep sea is cumulatively important for global elemental cycling yet is difficult to quantify and characterize due to low cell density and slow growth.... -
atmospheric depositon effect on bacterial diversity
Atmospheric inputs from mineral and anthropogenic sources are nowadays increasing globally due to desertification in one hand and industrialization on the other. In this... -
MedSeA project 16S rRNA metabarcoding
In this study, bacterial community composition changes were studied based on 16S rRNA sequencing at two fractions (0.1-0.2 and >0.2 µm) during a 10-day fully factorial... -
Metagenome analysis of the trench microbiome project on Northwest Pacific Ocean
The trench microbiome project analyzed planktonic microbiomes associated with sea surface to hadal waters along the water columns on Mariana, Ogasawara (Izu-Bonin), Japan and... -
Arctic microbiome along Svalbard Cross Shelf transects (2018 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects (Kongsfjorden), at different depths, based on V4-V5 16S rRNA gene amplicon... -
Library construction from subnanogram DNA for marine metagenomics
Shotgun metagenomic sequencing has been one of the indispensable techniques in environmental microbiology by the advancement of high-throughput sequencing technologies. However,... -
Environmental determinants of distribution of planktonic diplonemids and kine...
We amplified a widely used barcode, the V9 region of the SSU rRNA gene, to study the effect of environment on the distribution of two heterotrophic protistan lineages in marine... -
Arctic microbiome along Svalbard Cross Shelf transects (2017 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects (Kongsfjorden and Rijpfjorden), at different depths, based on V4-V5 16S rRNA... -
Characterization of bacterial communities associated with the particulate fra...
A previous study of microbial diversity in the Southern Ocean during the Keops1 cruise showed an important response of the bacterial community to the fe-induced phytoplankton... -
A metagenetic approach for revealing community structure of marine planktonic...
Metagenetic approach is rapidly developing method for revealing community structure from bulk environmental samples. Marine planktonic copepods are diverse and abundant groups... -
Planktonic bacterial communities in the arctic Canada Basin and Kongsfjorden
Planktonic bacteria play key role in biogeochemical cycles and energy flow in marine ecosystems. However, our knowledge of the extent and character of bacterial diversity in... -
Bacterial diversity of marine planktonic size-fractionated samples
16S rRNA sequencing of a 2-years temporal serie in Blanes Bay Microbial Observatory. -
Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
Latitudinal transect of the Atlantic Ocean, depth range from 20-200m, size fractioned by filtering (0.22, 3, 8 µm). Amplicon Sequencing of the V5-V6 region of the bacterial 16s...