41 datasets found

In March 2023, cell densities of the Arctic diatom Thalassiosira gravida (isolated from the Central Arctic Ocean) were determined to calculate its growth rates at different...

This dataset provides metadata of Antarctic deep-water sponges (Demospongiae and Hexactinellida) and sediment collected for microbiome analysis during expeditions PS96 (RV...

Prospective, multicentre, longitudinal and controlled study of n=60 stable patients with COPD and n=30 controls. Dataset includes:16S rRNA-seq in oropharyngeal (OP) swabs,...

Urban sprawl increasingly affects the ecology of natural populations, including host- microbiota interactions, with observed differences in the gut microbiota between urban and...

Sponges (Porifera) host diverse and species-specific communities of microbial symbionts with which they maintain tight interactions. However, knowledge on the microbiomes of...

Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to...

Until now few studies have explored the microbiomes of glass sponges (Hexactinellida). Vazella pourtalesii forms globally unique, monospecific sponge grounds under low-oxygen...

Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity,...

NeighborFinder is an R package that implements a local network inference method designed for microbiome data. It enables the targeted discovery of direct neighbors around a...

This dataset combines 8 public cohorts from 9 countries, with a total of 5,565 human stool samples profiled by shotgun metagenomic sequencing, and includes both healthy...

This dataset provides metadata of bottom water samples collected for microbiome analysis during expeditions PS96 (RV Polarstern, 2015/16) and JR17003a (RRS James Clark Ross,...

This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic...

Microbial diversity in coastal areas of Sichang island in Thailand

Short chain fatty acid profiling of ileostomy samples. 16 volunteers received yogurt, L. rhamnosus or placebo in different orders. Ileostomy samples were collected in the...

Ileostomy effluent samples were collected for metatranscriptomic profiling. The samples were collected for the INSIDE explorative diatry study. The study was aimed to...

Metataxonomic profiling (16S) of ileostomy samples. The samples were collected for the INSIDE double-blinded, placebo controlled explorative dietary study. The study was aimed...

This study used 16S and 18S rRNA genes pyrosequencing derived metagenomic DNA to obtain the microbial profiles of a marine tropical reef surface of Kham island, Trat province,...

This dataset comprises the physiological and behavioural stress response of the deep pelagic jellyfish Periphylla periphylla to anthropogenic disturbance. Specifically, we...

An exhaustive analysis was performed on more than 2,000 microbiota from 44 French Protected Designation of Origin (PDO) cheeses and associated milks. We characterized the...

In this study, the color diversity of the PDO Munster was investigated with a special emphasis on heterogeneity and the link with biotic and abiotic factors. To do so, the...