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Universal Amplicon Sequences (mixed 16S/18S) from GEOTRACES Cruises GA03 and ...
Dedicated sampling campaigns such as JGOFS, CLIVAR, and GEOTRACES have quantified critical oceanic biogeochemical processes on a global scale. Integrating these measurements... -
multiple samples Metagenome
This study aimed to understand the abundance and diversity of ammonia/methane oxidizing bacteria communities using DPeTTs-PCR method. amoA/pmoA genes were collected by... -
Environmental DNA metabarcoding provides enhanced detection of the European e...
Due to increasing reliance on pumping stations for water level management, and emerging knowledge of their adverse ecological impacts on whole fish communities, it is important... -
Heat-evolved algal symbionts enhance thermotolerance of adult corals
Ocean warming has caused coral mass bleaching and mortality worldwide and the persistence of symbiotic reef-building corals requires rapid acclimation or adaptation.... -
Microbial communities during the first hours of colonization of polyethylene,...
Investigation of microbial communities colonizing polytehylene, polystyrene, and aquarium stones after 1h, 5h, and 10h at three different sites within the Warnow river, Germany... -
Bacteria in aquaponics vs. recirculating aquaculture
Aquaponics is an innovative method for sustainable food production, where plants absorb nutrients from the effluents of fish farming. We tested if aquaponics with mint as the... -
Sipunculus nudus Raw sequence reads
16S rRNA sequence reads -
Microvolume DNA Extraction Methods for Microscale Amplicon and Metagenomic St...
Here we present and validate two novel microvolume DNA extraction techniques that employ either i) physical or ii) chemical lysis to rupture cells, facilitating accurate... -
Silage and animal feed yeasts from Hungary
Yeast were collected from silage and non-fermented feed samples from Hungary, S. cerevisiae isolates were sequenced. Bacterial metabarcoding analysis was performed on the feed... -
mini PCR: effects of PCR rxn volume and gDNA input validation
part of mackerel paper -
Fish Metabarcoding of 12S and CytB for surface eDNA samples near Safety Sound...
Metabarcoding eDNA samples taken from marine sites near Safety Sound, Alaska. Samples were amplified using MiFish-U primers (12S) and AKOncCytB (CytB). These samples were taken... -
Cold-water coral microbiomes (Acanthogorgia spp. Desmophyllum dianthus, and L...
We sequenced 16S rRNA gene amplicon surveys of 28 samples of deep-sea corals Acanthogorgia aspera, Acanthogorgia spissa, Desmophyllum dianthus, and Lophelia pertusa... -
Distinct microbial dynamics in three mucosal surfaces of Atlantic salmon (Sal...
Atlantic salmon is a valuable aquaculture species that requires both fresh and seawater to complete its life cycle and the transition of fish between these two habitats is often... -
amoA gene of soil
We investigate the effects of both single and co-application of BNI, UI, or BC with chemical fertilizer on NH3 volatilization, N2O emission, N leaching, crop N uptake, and NUE... -
Metagenomic survey of pre-harvest agricultural water using long read sequencing
Leafy greens are responsible for nearly half of the produce-related Shiga toxin-producing Escherichia coli (STEC) outbreaks in the United States, implicating agricultural water... -
Pearl River metagenomics Raw sequence reads
Investigate the archaea community in Pearl River estuary -
Recovery of high-quality assembled genomes via single-cell genome-guided binn...
High-quality (HQ) reference genomes are essential for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. However, existing... -
A matter of choice: Understanding the interactions between epiphytic foramini...
The interactions between epiphytic foraminifera and their seagrass host Halophila stipulacea -
Fish Metabarcoding of 12S and CytB for surface eDNA samples near Robe Lake, A...
Fish metabarcoding of eDNA water samples taken from near Robe Lake, Alaska. The samples were amplified using the MiFish-U primers (12S) and the AKOncCytB primers (CytB). -
Metagenome isolated from a hydrothermal vent
This project studied microbial metabolism and ecotype differentiation in the carbonate chimneys at the Lost City Hydrothermal Field, which are bathed in high temperature...