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Seasonal shifts of microbial methane oxidation in Arctic shelf waters above g...
Our project aims at studying the microbial commmunities thriving in Arctic shelf waters above methane gas seeps west of Svalbard. We are using an amplicon-based approach to... -
Microvolume DNA Extraction Methods for Microscale Amplicon and Metagenomic St...
Here we present and validate two novel microvolume DNA extraction techniques that employ either i) physical or ii) chemical lysis to rupture cells, facilitating accurate... -
blocking PCR amplification of metazoan DNA for protistan diversity
Protists form the basis of marine food webs. However, the understanding of protistan diversity is typically impeded by the predominance of metazoans, especially when employing... -
Cross-domain biodiversity effects: linking diatom species and intraspecific r...
Interactions between bacteria and microalgae are important for the functioning of aquatic ecosystems, yet interactions based on the biodiversity of these two domains are... -
Intertidal transects of the microbial communities from West Beach of Calvert ...
Sandy beaches dominate coastlines world wide and serve as buffers between land and sea. These are dynamic environments composed of shifting sediments and variable mixtures of... -
DDCA-metagenome
Evaluation of biodiversity and prediction of environmental changes by digital dna chip for establishment of core technology for the preservation and regeneration of marine... -
Seasonal shifts of microbial methane oxidation in Arctic shelf waters above g...
Our project aims at studying the microbial commmunities thriving in Arctic shelf waters above methane gas seeps west of Svalbard. We are using an amplicon-based approach to... -
Single-cell view of deep-sea microbial activity and intracommunity heterogeneity
Microbial activity in the deep sea is cumulatively important for global elemental cycling yet is difficult to quantify and characterize due to low cell density and slow growth.... -
Impact of Phaeobacter inhibens wildtype and mutants on bacterial communities ...
In this project, we aimed at investigating the impact of Phaeobacter inhibens wildtype and two mutants with mutations in the TDA and AHL regulator protein, respectively, on... -
Earth Microbiome Project Multi-omics (EMP500)
The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial... -
Polymetallic nodule field Targeted loci environmental
Abyssal sediments, polymetallic nodules, and water-column samples were collected from the UKSRL1 claim area within the Clarion-Clipperton fracture zone in the Pacific Ocean. -
Ocean Sampling Day (OSD) 2014: AUTHORITY-RAW amplicon and metagenome sequenci...
Sequencing of amplicon and metagenome samples from the main OSD event, representing joint effort of marine sampling stations around the world. The OSD campaign aims to analyze... -
Deepwater Horizon Oil Spill (DHOS) plume metatranscriptomes
Metatranscriptomes from the proximal and distal plumes sampled during the Deepwater Horizon Oil Spill -
Peruvian eddy shotgun metagenomes
Shotgun metagenomes sampled from a mesoscale water eddy during strong upwelling conditions in Eastern tropical South Pacific waters off the Peruvian coast, February to March 2013. -
Niche partitioning of diverse sulfur oxidizing bacteria at hydrothermal vents
In the dark ocean primary production is carried out by chemolithoautotrophic microorganisms, with the oxidation of reduced sulfur compounds being a major driver for microbial... -
Pelagic Gulf of Mexico Targeted loci environmental
Methane and microbial dynamics in the Gulf of Mexico water column -
marine metagenome Raw sequence reads
BIOSSCOPE AE1614 July Cruise -
Environmental determinants of distribution of planktonic diplonemids and kine...
We amplified a widely used barcode, the V9 region of the SSU rRNA gene, to study the effect of environment on the distribution of two heterotrophic protistan lineages in marine... -
Mississippi River plume enriches microbial diversity in the northern Gulf of ...
Mississippi River plume enriches microbial diversity in the northern Gulf of Mexico -
metagenomic amplicon sequencing of NRPS and PKS domains along environmental g...
The aim of this study was to assess the natural product potential by sequencing domains of NRPS and PKS and linking it to environmental factors. Additionally, the taxonomic...