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Active microbiome data of Penaeus stylirostris hemolymph and its rearing wate...
Sequencing data for this project were acquired from extraction of total RNA from the hemolymph of Penaeus stylirostris shrimp and from the water of their environment. The shrimp... -
Vibrio Cholera from Bangladesh
Vibrio Cholera from Bangladesh -
Comparative transcriptomics identifies genes underlying growth performance of...
In this study, we aimed to investigate differential gene expression among spat of the pearl oyster Pinctada margaritifera with distinct growth phenotypes. Two groups of P.... -
RNA sequencing of Crassostrea gigas for PESTO project, 2022
This study goes further previous investigations which highlited impacts of pesticides from the gene to the organism scales and sometimes in a multigenerational way. However,... -
Crassostrea gigas hemocytes scRNA-seq sequences
The 10X Genomics protocol was followed to prepare gel in emulsion beads containing single cells, hydrogel beads, and reverse transcription reagents, perform barcoded cDNA... -
Bacterial isolates from patients attending regional referral hospitals in Tan...
Miscellaneous bacterial isolates collected at six regional referral hospitals in Tanzania in 2020-2021. The "ESKAPE pathogen" isolates from this project were published in... -
Genomic epidemiology and patterns of antimicrobial resistance of neonatal sep...
The level of antibiotic resistance in neonatal infections and its impact on mortality in low-middle income countries (LMICs) is unacceptably high. The study, entitled the Burden... -
Transcriptome (RNA-seq) of Tilapia (Sarotherodon melanotheron), gills, HypeSA...
Genomics and ecophysiology of hypersalinity in a fish subjected to climate change, Sarotherodon melanotheron. -
Characterization and genetic variation of Vibrio cholerae isolated from clini...
Cholera is still an important public health problem in several countries including Thailand. In this study, a collection of clinical and environmental V. cholerae serogroup O1,... -
Rapid assessment of phytoplankton assemblages using Next Generation Sequencin...
Harmful algal blooms have important implications for the health, functioning and services of aquatic ecosystems. Our ability to detect and monitor these events is often... -
DNA barcoding of nematodes using the MinION
Many nematode species are parasitic and threaten the health of plants and animals, including humans, on a global scale. Advances in DNA sequencing techniques have allowed for... -
Methylseq of Crassostrea gigas for PESTO project, 2022
This study goes further previous investigations which highlited impacts of pesticides from the gene to the organism scales and sometimes in a multigenerational way. However,... -
RNAseq analysis reveals that transgenerational exposure to ocean acidificatio...
Transgenerational exposure to ocean acidification impacts the hepatic transcriptome of European sea bass