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Loxodes magnus indel polymorphisms and variant calling
Indel and variant calling in Loxodes magnus nuclear genomes for detection of putative IESs. Please see Readme for more information. -
Shortlists of conserved domains for searches of key genes in Loxodes
Shortlists of conserved protein domains for different groups of genes of interest in the ciliate Loxodes magnus. Lists use InterPro domain identifiers, and were searched against... -
Immunofluorescence of Loxodes ciliate nuclei for histones, histone marks and 6mA
Localization of histones, histone modifications, and 6mA base modification to specific nuclei types in Loxodes ciliates by immunofluorescence and imaging of whole cells. This... -
FACS run data from Loxodes magnus nuclei separation for nucleosomal sequencing
Run data from FACS purification of Loxodes magnus macro- and micronuclei for nucleosomal sequencing. See README.md for details -
Loxodes magnus genome assemblies and annotations
De novo assemblies and genome annotations for Loxodes magnus (Ciliophora: Karyorelictea), incorporating gene predictions with ambiguous genetic codes. -
FACS run data from Mesodinium rubrum nuclei separation for genome sequencing
Run data from FACS purification of Mesodinium rubrum macro- and micronuclei for genome sequencing. See README.md for details.
