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mini PCR: effects of PCR rxn volume and gDNA input validation
part of mackerel paper -
UBINAM_incubations_and_experiments
1_year_seawater_incubations_and_1_month_degradation_experiments_to_various_biolastic_materials -
Drinking water mycobacteria 65-kD heat-shock protein (hsp65) gene raw sequenc...
A 441-bp fragment of the 65-kD heat-shock protein (hsp65) was sequenced to gather taxonomic information about non-tuberculous mycobacteria (NTM) in two drinking water... -
Lab grown marine biofilms with triclosan - raw sequence reads
Lab grown marine biofilms with triclosan -
The sea star, Pisaster ochraceus, has unique and dominant bacteria.
All animals live in close association with bacteria, but for most hosts little is known about the distribution and host-specificity of these bacteria. We used amplicon... -
Antarctic glacial meltwater impacts the diversity of fungal parasites associa...
Aquatic ecosystems are frequently overlooked as fungal habitats, although there is increasing evidence that their diversity and ecological importance are greater than previously... -
Dangerous hitchhikers: Investigating harmful phytoplankton species associated...
Accumulation of marine plastic debris is an emerging and worsening man-made problem. It is not only becoming an ecological threat to marine animals but could also facilitate the... -
microbial diversity on aquaculture system
The microbial of 4 different fish farming systems was investigated with the 16s rRNA gene -
Bacterial communities in drink water
The distribution of bacterial communities in drink water -
Macroalgal Morphology affects composition and settlement of microbial communi...
Macroalgae (seaweeds) have an intimate relationship with their microbial symbionts. Microbial communities associated with macroalgal surfaces (epibiota) are generally... -
Continental-scale variation in seaweed host-associated bacterial communities ...
Interactions between hosts and associated microbial communities can fundamentally shape the development and ecology of 'holobionts', from humans to marine habitat-forming... -
Microbial community of sediments at Auka hydrothermal vent field in Pescadero...
Auka hydrothermal vent field is located at 3650m depth in Pescadero Basin, at the mouth of the Gulf of California. Auka is a sediment hosted hydrothermal vent field, and shares... -
Exploring microbial life in the Antarctica Dry Valley lakes
check for publication -
Earth Microbiome Project Multi-omics (EMP500)
The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial... -
Comparison of four DNA extraction methods for comprehensive assessment of 16S...
Amplicon sequencing (16s) of marine biofilm communities using four different DNA extraction methods -
Marine biofilm Targeted Locus (Loci)
To study the bacterial community in PDMS and Epoxy epoxide -
Seagrass Microbiome Survey 2015, Calvert Island, British Columbia
This study investigates microbial communities from 39 water 110 zostera, and 9 artificial seagrass unit samples. -
High habitat-specificity in fungal communities of an oligo-mesotrophic, tempe...
Freshwater fungi are a poorly studied paraphyletic group that include a high diversity of phyla. Most studies of aquatic fungal diversity have focussed on single habitats, thus... -
Microbial diversity in arctic freshwaters is structured by inoculation of mic...
A 12-year sample archive of DNA from Alaskan arctic tundra ecosystems are available to the Earth Microbiome Project for comparison of microbial diversity across a range of... -
Drinking water 16S rRNA gene raw sequence reads
Water-main biofilms, tap water, and corrosion-associated communities were collected from a chloraminated drinking water distribution system (DWDS) in the United States and a...