-
18S amplicon sequencing
To better understand the protistan community structure and protistan species surviving in hypoxic waters -
multiple samples Metagenome
This study aimed to understand the abundance and diversity of ammonia/methane oxidizing bacteria communities using DPeTTs-PCR method. amoA/pmoA genes were collected by... -
Viruses associated with Daphnia mendotae (Arthropoda Cladocera)
Viral metagenomes prepared from 200 Daphnia mendotae collected from Oneida Lake, NY in June and August 2010. -
Gut microbial community in the shrimp Litopenaeus vannamei cultured under ind...
The microbial communities interact with the host immunity and physiological functions. In this study, we investigated the bacterial composition in the shrimp Litopenaeus... -
Microbial communities during the first hours of colonization of polyethylene,...
Investigation of microbial communities colonizing polytehylene, polystyrene, and aquarium stones after 1h, 5h, and 10h at three different sites within the Warnow river, Germany... -
Vistula estuary bacterial Metagenome
Bacterial diversity and community structure in Vistula river estuary (Southern Baltic) studied at the 16S rRNA gene fragments level. Samples were collected four times (in... -
Total bacteria from river sediment and runoff water Targeted Locus (Loci)
In this study, we applied 454 high-throughput pyrosequencing to identify bacterial pathogen DNA sequences, including those not traditionally monitored by MST and correlated... -
Petroleum Bioremediation Evaluation in Atlantic Amazon
This project has the objective to evaluate the bioremediation potential in atlantic amazon area regarding petroleum and its derivates. The region in question has a area... -
Skin and gut microbiome of tadpoles exposed to water sources
This study compares the alterations on the skin and gut bacteria of tadpoles from Pelophylax perezi and Bufo spinosus when exposed to two water sources -
Are there chinks in the crocodile’s armor? Characterizing saltwater crocodile...
The outer keratin layer of crocodile skin forms a physical barrier against mechanical damage and pathogens. However, if breached, the resulting damage can cause the skin to be... -
Bacteria diversity and genetic pool on a 20 m deep well
In this study we investigated the diversity of microorganisms dwelling in the water column of a 20 m deep well located in the city of Mérida, Yucatán, as well as the gene pool... -
Bacteria in Norwegian drinking water and water-main biofilms
Bacterial 16S rRNA gene amplicons were sequenced using the Illumina MiSeq platform to investigate DNA samples from three drinking water distribution networks in Norway (Bergen,... -
Freshwater Reservoir Metagenome
We used high-throughput sequencing to follow temporal shifts in the composition of cyanophages and the associated bacterioplankton -
Host genotype and diet impacts on gut microbiome and bacterioplankton composi...
Here, we investigated the effects of host genotype and diet on both the gut microbiome and the surrounding bacterioplankton in the freshwater crustacean Daphnia magna. -
Zooplankton microbiomes
Zooplankton plays a crucial role in the functioning of aquatic ecosystems through its key position in aquatic food webs. However, little is known about their microbiome... -
16S rRNA sequencing of water microbiota influenced by pollutants
we provide important information for the variation of water microbial community influenced by pollutants in wastewater -
SWIR sediment and water metagenome Targeted loci environmental
V3 metagenomics of sediment and water samples collected from South West Indian Ridge -
LMO 2015, 2016, 2019 (0.2, 3-0.2, 3)
Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2014-15 using three different filter setups: directly on 0.2... -
Methanotrophy light experiment - Raw sequence reads
Sediment 16S rRNA gene amplicon data from light exposure experiments -
flax-retting water Raw sequence reads
flax-retting water sample microbial community diversity