14 datasets found

This project aims to demonstrate the feasibility and reproducibility of bioassessment of organisms across the tree of life in large aquatic ecosystems using PCR-free ultra-deep...

Bacterial 16S rRNA gene amplicons were sequenced using the Illumina MiSeq platform to investigate DNA samples from three drinking water distribution networks in Norway (Bergen,...

In this study, we use whole-genome sequence data to identify diagnostic SNPs for the development of CRISPR-based SHERLOCK assays capable of rapidly, accurately, and sensitively...

Sewer biofilm and sewage slurry, storm drain bioflim and water slurry, and stormwater taken from rainstorms

The Baltic Sea has been affected by eutrophication for several decades with the result of a gradual increase of oxygen minimum zones at the sea floor and release of phosphate...

Sequence datasets were collected across hydrological continuum of submarine groundwater discharge sites in Indonesia, USA, and Germany. Microbial community structure was...

Algicidal infochemicals produced by marine bacteria have the unique ability to influence the structure of prokaryotic and eukaryotic microbial communities simultaneously....

Sewer biofilm and sewage slurry, storm drain bioflim and water slurry, and stormwater taken from rainstorms 16S V4 region used for source tracking

The goal of this study is to compare the microbial community in the early years of an oil sands end pit lake (named Base Mine Lake or BML) to that of a freshwater reservoir...

Vitamin B1 (thiamin, B1) is an essential micronutrient for cells, yet intriguingly in aquatic systems most bacterioplankton are unable to synthesize it de novo (auxotrophy),...

Groundwater is often a desirable drinking water source because it has low suspended solids and minimal biological activity, often requiring little if any treatment prior to...

Metagenomes acquired from various fish species at the FDA Center for Veterinary Medicine (CVM).

Milkfish, an important aquaculture species in Asian countries, are traditionally cultured in outdoor-based systems. There, they experience potentially stressful fluctuations in...

The present study aims to describe, with 16S DNA metabarcoding, the distal gut microbiota of a captive-reared population of juvenile Atlantic salmon (approx. one-year-old) with...