13 datasets found

Oleaginous and flavinogenic yeasts are of biotechnological interest because they can produce a number of important fatty-acid derived molecules, termed oleochemicals, and...

Fungus sequenced at Nevada State Public Health Lab that are not Candida auris

Genomes from the Y1000+ project aiming at sequencing the genomes of all the known Saccharomycotina yeasts

Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units.

The increased usage of long read sequencing has not been matched with publicly available databases suited for error-prone long reads when applied to metabarcodes. We address...

We mapped nucleosome positions genome-wide in 12 Ascomycetes Overall design: Illumina sequencing of mononucleosomal DNA isolated from mid-log cultures grown in rich medium...

Genome sequencing and assembly of S. cerevisiae BY4743, Y. lipolytica PO1f, and K. phaffii 76273.

Yeast genomes can be assembled from sequencing data, but genome integrations and episomal plasmids often fail to be resolved with accuracy, completeness, and contiguity....

Aim of this project is to perform a comparative genomic study (including all S. cerevisiae sequenced and available) of the variability and evolutionary traits of yeast.

Study the transcriptional response of S. cerevisiae and Y. lipolytica under the exposure of 3 different compounds: p-coumaric acid, cinnamic acid and ferulic acid. These...

Species and metagenomic samples used for the FELIX (Finding Engineering-Linked Indicators) project.

Here, we used RNA-seq to quantify expression conservation across many Ascomycete yeasts. Overall design: We used strand-specific RNA-seq (dUTP) to quantify mRNA expression in...

S.cer (strain Cen.PK113-7D), K.marx (strain CBS6556), and Y.lipo (strain W29) transcriptional profiles were compared after chemostat growth Transcriptome