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Sequencing and assembly of transcriptomes of copepods from Oregon
This project aimed to assemble and describe the protein-coding genes from the genomes of populations of Tigriopus californicus from Oregon, USA. -
Whole genome resequencing of Tigriopus californicus (Pool-Seq)
We sequenced hybrids of two populations of Tigriopus californicus and subjected hybrids to strong thermal selection for 15 generations to determine genomic architecture of... -
Mitonuclear hybrid sequencing
Sequencing of pooled mitonuclear hybrids, generated by 10 generations of paternal, nonrecombinant backcrosses. Sequences also include the paternal source lines. Each pool is... -
Bulk segregant analysis of male sterility in intertidal copepods
Offspring from matings between divergent populations can often show reduced fitness due to genetic incompatibilities between the parents. Using the tidepool copepod Tigriopus... -
Circadian gene expression in intertidal copepods
This study aimed aimed at quantifying transcriptional profiles associated with circadian rhythms in intertidal copepods, and in testing for differences in cyclical transcription... -
Tigriopus californicus whole transcriptome sequencing from reproductive tract...
This study is aimed at identifying genes with sex-limited expression and their genomic locations. -
Strong selective effects of mitochondrial DNA on the nuclear genome
Efficient ATP synthesis requires the coordinated functions of proteins and RNAs produced from the nuclear genome and the mitochondrial genome. Yet, the importance of coevolution... -
Whole-genome sequencing of copepod inbred lines
This sequencing project was intended to genotype recombinant inbred lines (RILs) of the copepod Tigriopus californicus.</p><p>RILs were generated by crossing... -
Tigriopus californicus sex-specific mitochondrial basis of aging
Two geographic populations of Tigriopus californicus were mated to generate two parental lines and two reciprocal crosses. Samples from both sexes at both 28 days and 56 days... -
Tigriopus californicus strain:San Diego Genome sequencing and assembly
This project aims at sequencing the genome of the marine copepod Tigriopus californicus. This species has served as an excellent model for studies of speciation, adaptation, and... -
Interpopulation differences in gene regulation in response to acute thermal s...
Background: Geographic variation in the thermal environment impacts a broad range of biochemical and physiological processes and can be a major selective force leading to local... -
Tigriopus californicus Transcriptome or Gene expression
Here, we examine transcriptome-wide divergence and polymorphism in the marine copepod Tigriopus californicus, a species where allopatric evolution has led to replicate sets of... -
Seawater carbonate chemistry and survivorship, fecundity, and development of ...
Intertidal zones are highly dynamic and harsh habitats: organisms that persist there must face many stressors, including drastic changes in seawater pH, which can be strongly... -
Seawater carbonate chemistry and hatching success and hatching frequency of A...
Rising oceanic pCO2 levels could affect many traits in fish early life stages, but only few species to date have shown direct CO2-induced survival reductions. This might partly...