13 datasets found

We mapped nucleosome positions genome-wide in 12 Ascomycetes Overall design: Illumina sequencing of mononucleosomal DNA isolated from mid-log cultures grown in rich medium...

Genomic surveys of yeast hybrid species isolated from the wild and from human-related environment, aimed at the reconstruction of the natural evolution of Saccharomyces spp....

We profiled the transcriptomes of four Saccharomyces species, as well as pairwise hybrids between three of the species with S. cerevisiae Overall design: For pairwise...

We describe the genome-wide nucleosome profiles of four related yeast species. All species display the same global organization features first described in S. cerevisiae: a...

Previously we have constructed 11 chromosome replacement lines between two closely related species, Saccharomyces cerevisiae (Sc) and Saccharomyces bayanus (Sb), so the...

DNA replication initiates from defined locations called replication origins some origins are highly active whereas others are dormant and rarely used. Origins also differ in...

The objective of this experiment was to study the mechanism of de novo gene birth in Saccharomyces cerevisiae. While the model organism S. cerevisiae has one of the highest...

Here, we used RNA-seq to quantify expression conservation across many Ascomycete yeasts. Overall design: We used strand-specific RNA-seq (dUTP) to quantify mRNA expression in...

Study the micorbiomes of woody tissues of grapevines that were treated or not by sodium arsenite

reveal the general role of impaired protein complex assembly in complex incompatibilities

RNAi, a gene-silencing pathway triggered by double-stranded RNA, is conserved in diverse eukaryotic species but has been lost in the model budding yeast, Saccharomyces...

The ability to measure the number of gene-specific mRNA molecules in individual mammalian cells has transformed the transcriptomics field. Among the key technologies enabling...

We sequenced non-ribosomal RNA from a upf1 deletion mutant of S. cerevisiae, and from wild type S. mikatae and S. bayanus, and identified a new class of yeast introns. Overall...