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Genetic analysys of Manila clam (Ruditapes philippinarum) populations
2b-RAD genotyping of Manila clam populations inhabiting areas subject to different anthropogenic impact -
Ruditapes philippinarum (Zebra II) Genome sequencing
Zebra II was a new breed of Ruditapes philippinarum with high-quality growth traits. Its genome was sequenced using third-generation sequencing technology and HIC technology. -
Sex-related differences in the digestive gland of the Manila clam Ruditapes p...
This study aims to address sex-specific differences in the transcriptome of the digestive gland (which includes some gonad tissue) of adult Manila clams at the early stages of... -
Transcriptome of aerial exposure and reimmersion of Manila clam
Transcriptome of aerial exposure and reimmersion of Manila clam -
Seawater carbonate chemistry and molecular pathways, physiological function, ...
In estuarine ecosystems, bivalves experience large pH fluctuations caused by the anthropogenic elevation of atmospheric CO2 and Cu pollution. This study investigates whether Cu... -
Seawater acidification affects the physiological energetics and spawning capa...
Ocean acidification is predicted to have widespread implications for marine bivalve mollusks. While our understanding of its impact on their physiological and behavioral... -
Transcriptomic analysis of siphon regeneration in Ruditapes philippinarum
Transcriptomic analysis of siphon regeneration in Ruditapes philippinarum -
Five aquatic species 2b-RAD raw data. Building-loci pipeline comparisons.
2b-RAD raw data from five aquatic species representing different genomic and/or population structure scenarios. Used for building-loci pipeline comparisons between STACKS 2 and... -
RNA-sequencing
RNA-seq of Ruditapes philippinarum gill tissue -
Ruditapes philippinarum Transcriptome
To assess the changes of Ruditapes philippinarum Transcriptome under the BaP exposure -
Seawater carbonate chemistry and the impacts of low-pH priming on Manila cla...
Here, we examined the impacts of low-pH priming on Manila clam broodstock and its impacts on broodstock physiology and larval outcomes. Measures of broodstock and larval... -
Ruditapes philippinarum (Manila clam), genomic and transcriptomic data
This project collects the genomic and transcriptomic data generated for Ruditapes philippinarum, common name Manila clam, to facilitate genome assembly and annotation as part of... -
Ruditapes philippinarum Transcriptome or Gene expression
The differential expression genes and relative signal pathways in the gonads of male and female Ruditapes philippinarum clams when the expression of GnRH was inhibited by RNAi... -
Transcriptome data of Ruditapes philippinarum under Vibrio anguillarum stress
Transcriptome data of Ruditapes philippinarum under Vibrio anguillarum stress -
RNA-seq of R. philippinarum under low salinity stress
Transcirptomic sequencing of manila clam Ruditapes philippinarum under low salinity stress -
Ruditapes philippinarum sequencing
Sequencing of Ruditapes philippinarum after exposure to nonylphenol and estrogen receptor disruption, which aimed to investigate the mechanism of nonylphenol toxicity and the... -
Ruditapes philippinarum Genome sequencing and assembly
we sequenced the whole-genome and transcriptome (three tissues) of the Korean short-necked clam to uderstand its genomic feature and this data could be useful for more advanced... -
Ruditapes philippinarum Raw sequence reads
Transcriptome Analysis of Ruditapes philippinarum under Polycyclic Aromatic Hydrocarbon Stress -
Transcriptome of different shell color strains of Manila clam
Ruditapes philippinarum is one of the most commercially important marine shellfish in China. Shell color was used as an important trait for selection breeding of shellfish... -
Molecular responses to salinity stress in clam Ruditapes philippinarum
The Manila clams Ruditapes philippinarum are worldwide shellfish in marine intertidal zone, which usually encounter a great risk of salinity stress in their coastal habitats....
