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De novo assembly of Pungitius sinensis
Whole genome sequence assembly for Pungitius sinensis. A male of the 4th generation inbred strain, which originated from Oboro River, Hokkaido, Japan, was used. -
Whole genome re-sequencing of Japanese Hokkaido Pungitius
Whole genome re-sequencing data of Japanese Pungitius collected from Hokkaido Island. Pungitius tymensis and the freshwater-type (Pungitius sp.) were collected from Oboro River,... -
Genomic analysis of the nine-spined sticklebacks
A phylogenomics approach was used to explore the phylogenetic relationships and differentiation pattern of the genus Pungitius. -
Pungitius RAD-seq sequencing
The global Pungitius stickleback evolutionary study. -
Population genomics and Genome sequencing of Pungitius sinensis
This database includes raw sequence reads from GBS, Pacbio and illumina sequencing -
Whole genome re-sequences of Japanese Pungitus sinensis
Whole genome re-sequencing of Japanese Pungitus sinensis collected from Mizudori Kansatsukan Mae in Akkeshi Japanin 2018. -
QTL of the lateral plate variation in Pungitius sticklebacks
This project aims to study the genetic bases of lateral plate variation in the western lineage of nine-spined sticklebacks (Pungitius pungitius) when they adapt to freshwater... -
WGS of allopatric P. pungitius and P. sinensis
Whole genome re-sequencing of allopatric Pungitius sinensis and P. pungitius. Wild-caught Pungitius sinensis (Musashi Tomiyo) and lab-raised Pungitius pungitius from Denmark... -
QTL mapping (Pungitius pungitius and P. sinensis)
For QTL mapping of behavioral and morphological traits, we backcrossed F1 females between a P. sinensis female and a P. pungitius to P. pungitius males. The backcross males were... -
sex chromosome evolution in nine-spine sticklebacks
The purpose of this study was to identify sex determining regions in nine-spine sticklebacks and evaluate their evolutionary history. Publication for this study is available... -
WGS of sympatric P. pungitius and P. sinensis
Whole genome re-sequencing of sympatric Pungitius pungitius and P. sinensis collected from Shiomi River, Akkeshi, Hokkaido, Japan.