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Response of Nematostella vectensis to abiotic stressors.
The aim of the project was to characterize a stress response in Nematostella vectensis to elevated temperatures, salinity, and UV exposure. Our study focused on two populations... -
Cnidarian cell type diversity revealed by whole-organism single-cell RNA-seq ...
We performed single-cell transcriptome analysis (using MARS-seq) in the cnidarian Nematostella vectensis. Additionally we performed bulk ATAC-seq experiments on wild-type... -
Transcriptome of miR-2022 knockdown in Nematostella
RNA sequencing libraries of 4 days old Nematostella planulae injected with control or anti-miR-2022 Morpholino Oligonucleotides -
Long read sequencing of Nematostella vectensis individuals
This study aims to use long-read sequencing of Nematostella vectensis to explore structural variation among individuals from different populations. -
Nematostella vectensis Transcriptome or Gene expression
we characterized the transcriptome of Nematostella females sampled before and during the different stages of spawning induction. Total RNA was enriched for mRNA and TrueSeq... -
Nematostella vectensis regeneration RNAseq time series
RNAseq time series of Nematostella vectensis (starlet sea anemone) during oral regeneration (heads were discarded) after sub-pharyngeal amputation of six week old juveniles.... -
Spatial transcriptome of Nematostella vectensis apical organ reveals its mole...
The spatial transcriptome data has allowed us to explore the differential gene expression among the oral-aboral domains and provided new insights into the apical organ... -
Evolutionary conservation of the eumetazoan gene regulatory landscape
Bilaterian animals differ from other metazoans in their apparent bilateral symmetry and the development of a third germ layer. Both might have facilitated the evolution of the... -
Unravelling the role of venom in predator-prey interactions using natural pop...
RNA-sequencing of Nv1 knockdown -
Post transcriptional modifications of miRNAs in the cnidarian Nematostella ve...
MicroRNAs of bilaterian animals undergo posttranscriptional modifications such as methylation, tailing and trimming that regulate miRNA stability and function. To gain insight... -
RNA-seq of Nematostella NvLsd1 mutants
RNAseq was performed on NvLsd1 mutants and controls (consisting of NvLsd1GFP/- and NvLsd1GFP/GFP animals) in quadruplicate at two different developmental stages: 4 day-old late... -
Nematostella vectensis Raw sequence reads
This study sampled wildtype stages throughout development and two sexually mature adult sexes. -
Do novel genes drive morphological novelty? An investigation of the nematosom...
This is a study of novel genes in nematosomes -
Toxin expression and function by an estuarine model species in a dynamic seas...
Amplicon sequencing of Nv1 region for both DNA and cDNA samples across 3 collecting periods for several individual Nematostella vectensis animals. -
Pol II pausing is a milestone on the road to complex animals
PRO-seq experiments in multiple organisms. Also, PRO-seq experiment of Nelfb and Nelfe degron mESC in serum/LIF with or without dTAG-13. Overall design: We used Precision... -
Sea anemone mesentery muscle profiling [bulk RNA-seq]
Isolated mesenteries from MHC::mCherry Adults were used to generate FACS-sorted RNA sequencing libraries in order to characterize gene use in Cnidarian smooth muscle. Transgenic... -
Identification of beta-catenin response genes in Nematostella vectensis embryos
Identification of beta-catenin response genes in Nematostella vectensis embryos -
Nematostella vectensis transcriptomes under starvation
In this study, we starved adult Starlet sea anemones (Nematostella vectensis) for 30 days and compared their gene expression profiles to the profiles of well-fed adult anemones.... -
ACME dissociation: a versatile cell fixation-dissociation method for single-c...
We performed single-cell transcriptome analysis (using 10x genomics 3' scRNA-seq v3.1 chemistry) in the sea anemone Nematostella vectensis (Cnidaria). Overall design: Several... -
NvPrdm14d-expressing neural progenitor cells contribute to non- ectodermal ne...
RNA-sequencing</p><p>of NvPrdm14d::GFP-expressing cells