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Transcriptomic analysis of Notch3 null mice
Notch pathway is essential during development, however mice withNotch3 deletion are viable and fertile. The data herein represent the transcriptome of Notch3 deleted mice. -
Micromesistius poutassou (blue whiting), genomic and transcriptomic data
This project collects the genomic and transcriptomic data generated for Micromesistius poutassou, common name blue whiting, to facilitate genome assembly and annotation as part... -
Raw sequence reads from Danish species
Raw reads from samples of danish species, sequenced with the purpose of assembling mito genomes for future references. -
Crosstalk with astrocytes establishes tumor edge in glioblastoma
Clinical outcomes for patients with glioblastoma (GBM) are extremely poor due to inevitable tumor recurrence even after extensive treatments. These recurrences are thought to... -
Meiofauna sulfides Raw sequence reads
unclassified sequences metagenomes ecological metagenomes aquatic metagenome -
Large scale metagenome assembly reveals novel animal-associated microbial div...
Large-scale metagenome assemblies of human microbiomes have produced a huge catalogue of previously unseen genomic data, but has been applied to only a few of the >66 000... -
Occurrence of mammalia relicts at site Sütto_6
This dataset has no description
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Germline mutation rate in vertebrates
We estimated the germline mutation rate of 68 species of vertebrates using WGS of pedigrees (i.e. at least 3 individuals mother, father, and their offspring). -
Comparative transcriptomic analysis of the response of CUG-clade Candida spec...
Pathogenic Candida fungi are a leading cause of opportunistic, hospital-associated bloodstream infections with high mortality rates, typically in immunocompromised patients.... -
Host-pathogen transcriptomics of pulmonary granulomatous lesions of murine pa...
Granulomas are important immunological structures in the host defense against the fungus Paracoccidioides brasiliensis, the main etiologic agent of Paracoccidioidomycosis (PCM),... -
Occurrence of mammalia relicts at site Sirgenstein Cave
This dataset has no description
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Endogenous RNA bind-n-seq (endo-bind-n-seq): determining RNA interaction moti...
RNA endo-bind-n-seq allows for the identification of RNA elements that are bound by RBPs, which are isolated from their physiological environments using immunoprecipitation and... -
Genome Skimming with Nanopore Sequencing Precisely Determines Global and Tran...
This study determines that genome skimming, shallow depth of sequencing, is capable of accurately quantifying global DNA methylation level across a range of vertebrates. -
RNA vesicles content of fungi: Candida albicans strain ATCC Cryptococcus neof...
RNA vesicles content of fungi. -
Tracing the genetic innovation mechanisms in origin and evolution of liver fr...
The emergence of the vertebrate liver is a prime example of the evolution of complex organs, yet the driving factors behind it remain unknown. Here, we utilize in vivo and in... -
Metabarcoding of Amazonia
Metabarcoding data of soil and liter collected in four localities across Brazilian Amazonia, using 16S ando 18S markers. -
Bottleneck_Sequencing_of_Animal_Tissue__WGS_
Study somatic mutation in animal tissues, including mutation burden accumulation through lifespan and mutational signatures. -
Yellowstone Carcass Metagenome
We assessed how predation by large carnivors affects soil properties and ecosystem functioning by altering microbial (bacteria, fungi) biodiversity and community composition. We... -
W4M00006_BPA-MMusculus
Study Metabolic shifts induced in vivo after perinatal exposure to low doses of BPA in CD-1 mice were assessed. In this study conducted by the ToxAlim-MeX team and the Tufts... -
Whole genome sequence of mouse gallbladder cancer
Using a mouse gallbladder cancer orthotopic model developed by us, we performed whole-genome sequencing of gallbladder cancer tissue.
