10 datasets found

Time course dataset of Hofstenia miamia embryos from 35 hours post laying to 145 hours post laying, as well as the post embryonic stages of Hatchling Juvenile, Late Juvenile,...

Genome, transcriptome, and epigenome data for the Acoel worm Hofstenia miamia. Data here are published in Gehrke et al. 2019.

Bioproject includes raw nanopore reads to construct a long-read based assembly. Also includes raw HiC reads and raw ATAC-seq reads

Hofstenia miamia scRNAseq regeneration time course of transversally bisected animals. Anterior and posterior fragments were pooled for each timepoint.

Hofstenia miamia embryo blastomeres 3a/3b were photoconverted into a red color, and were allowed to hatch. The hatched worms were then dissociated, and cells were sorted using...

Gene expression profiling after beta-catenin RNAi in the posterior of two regenerative species

Hofstenia miamia seqwell dataset where 3a/3b progeny were labeled, FACS sorted, and sequenced at 80 hours post laying

Raw sequencing reads associated with wound-induced neurogenesis paper

Developmental transcriptome of the acoel model Hofstenia miamia from Kimura et al., 2020. Samples were generated by pooling multiple individuals from the same developmental stage.

Transcriptome assembly of Illumina and 454 reads derived from mRNA collected from various regenerating and developmental stages