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marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
metatranscriptomic approaches to unravel taxonomic and functional diversities...
Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and... -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Baltic Sea metagenome assembly and MAG data sets: Coastal transect 2015 and L...
Reads for two datasets, assemblies and MAGs for these datasests as well as two other (PRJEB22997 and SRP077551) for the study named "Ecosystem-wide metagenomic binning enables... -
EMG produced TPA metagenomics assembly of PRJEB52452 data set (Malaspina Expe...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB52452, and was assembled with metaspades v3.15.3. This project... -
a take on the impact of pollution on coastal bacterial communities
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for... -
Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Trans...
One of the main concerns about the Arctic Ocean has been the changing sea ice regime with a reduction in the summer sea ice extent and a shift in dominance from thicker,... -
EMG produced TPA metagenomics assembly of PRJEB6608 data set (Metatranscripto...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB6608, and was assembled with metaSPAdes v3.14.1 and megahit... -
EMG produced TPA metagenomics assembly of PRJEB9740 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB9740, and was assembled with metaSPAdes v3.15.3, metaSPAdes... -
EGB sediment data (raw sequence reads)
DNA and RNA from sediment samples collected in the Eastern Gotland Basin -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB... -
EMG produced TPA metagenomics assembly of PRJEB4352 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB4352, and was assembled with megahit v1.2.9. This project... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
EMG produced TPA metagenomics assembly of PRJNA247822 data set (Ecological Ge...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA247822, and was assembled with SPAdes v3.14.1, metaSPAdes...
