Dataset - B2FIND

Metagenomic analysis of marine coastal waters

Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using...

EMG produced TPA metagenomics assembly of PRJNA656268 data set (Bio-GO-SHIP: ...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project...

a take on the impact of pollution on coastal bacterial communities

Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for...

Amplicon sequencing of Tara Oceans Polar Circle DNA samples corresponding to ...

Analysis of 18S DNA in Tara Oceans Polar Circle Protists size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small and large cell...

EMG produced TPA metagenomics assembly of the Marine microbial communities fr...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330135. This project includes samples from...

EMG produced TPA metagenomics assembly of PRJEB6608 data set (Metatranscripto...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB6608, and was assembled with metaSPAdes v3.14.1 and megahit...

Structure and function of picoplankton and virus communities along zonal grad...

Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)...

metatranscriptomic approaches to unravel taxonomic and functional diversities...

Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and...

Global Ocean Sampling Expedition

Collection of metagenomes obtained during the Global Ocean Sampling Expedition

Short-term variability in the microbial, nano- and picoplankton dynamics duri...

The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season.

Marine metagenomes from the bioGEOTRACES project

Marine metagenomes from the bioGEOTRACES project Metagenome

Temporal sampling of marine metagenomes from Station ALOHA and BATS

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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects

The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal...

EMG produced TPA metagenomics assembly of PRJNA777294 data set (Tracking Geno...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA777294, and was assembled with metaspades v3.15.3. This project...

Bermuda Atlantic Time-series Study metagenomes

Metagenome-assembled genome bins to assess the diversity and evolution of globally abundant deep-ocean bacteria.