Dataset - B2FIND

metatranscriptomic approaches to unravel taxonomic and functional diversities...

Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and...

Biogeography of coastal wetland bacterial communities experiencing sudden veg...

This study aims to describe how sediment microbial communities respond to the loss of vegetation through sudden vegetation die off (SVD) in two geographically separated...

Marine metagenomes from the bioGEOTRACES project

Marine metagenomes from the bioGEOTRACES project Metagenome

Temporal sampling of marine metagenomes from Station ALOHA and BATS

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Sea ice and seawater Raw sequence reads

Fungi are vastly understudied in the marine realm and the extent of their functionality as nutrient cyclers and parasites is constrained by the current understandings of fungal...

Metagenomic analysis of marine coastal waters

Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using...

seawater sample Metagenome

Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the...

Diet analysis of Japanese sardine and Pacific round herring larvae

A successful feeding on preferred prey is important for survival of fish larvae; however, it is difficult to obtain high taxonomic resolutions from damaged gut contents by...

marine metagenome Metagenome

To study the effect of diesel oil spills on microbial communities in the monitored basin experiment

Bermuda Atlantic Time-series Study metagenomes

Metagenome-assembled genome bins to assess the diversity and evolution of globally abundant deep-ocean bacteria.

HBC thrombolite metagenome

Metagenome of a intertidal thrombolitic mat community from Highborne Cay, Bahamas.

Metatranscriptome of an algal bloom from St Helena Bay on the west coast of S...

The aim of this project is to investigate changes in gene expression specifically genes linked to PCD the duration of an algal bloom event. The study was motivated by the...

Hawaii Dissolved Organic Matter (HIDOM) microcosm perturbation experiments

Marine dissolved organic matter (DOM) contains nearly as much carbon as the Earths atmosphere. To investigate the roles of planktonic marine microbes in the biogeochemical...

EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods

This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB...