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Genomics and transcriptomics of enrichment cultures of marine methanotroph
The Iheya North Knoll in the mid-Okinawa Trough is a methane-rich deep-sea hydrothermal field. To cultivate methane-oxidizing bacteria from the Iheya North field, a continuous... -
Structure and function of picoplankton and virus communities along zonal grad...
Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)... -
metatranscriptomic approaches to unravel taxonomic and functional diversities...
Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and... -
Marine metagenomes from the bioGEOTRACES project
Marine metagenomes from the bioGEOTRACES project Metagenome -
Temporal sampling of marine metagenomes from Station ALOHA and BATS
This dataset has no description
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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Sea ice and seawater Raw sequence reads
Fungi are vastly understudied in the marine realm and the extent of their functionality as nutrient cyclers and parasites is constrained by the current understandings of fungal... -
Metagenomic analysis of marine coastal waters
Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using... -
EMG produced TPA metagenomics assembly of PRJNA656268 data set (Bio-GO-SHIP: ...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project... -
seawater sample Metagenome
Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the... -
EMG produced TPA metagenomics assembly of PRJEB6608 data set (Metatranscripto...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB6608, and was assembled with metaSPAdes v3.14.1 and megahit... -
EMG produced TPA metagenomics assembly of PRJNA777294 data set (Tracking Geno...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA777294, and was assembled with metaspades v3.15.3. This project... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
Pelagic sediment metagenome of Gulf of Khambhat
Community structure and pollutant degradation ability of deep sediment microflora of Gulf of Khambhat using culture independent approach -
Bermuda Atlantic Time-series Study metagenomes
Metagenome-assembled genome bins to assess the diversity and evolution of globally abundant deep-ocean bacteria. -
EMG produced TPA metagenomics assembly of PRJNA656268 data set (Bio-GO-SHIP: ...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project... -
Metatranscriptome of an algal bloom from St Helena Bay on the west coast of S...
The aim of this project is to investigate changes in gene expression specifically genes linked to PCD the duration of an algal bloom event. The study was motivated by the... -
EGB sediment data (raw sequence reads)
DNA and RNA from sediment samples collected in the Eastern Gotland Basin -
Hawaii Dissolved Organic Matter (HIDOM) microcosm perturbation experiments
Marine dissolved organic matter (DOM) contains nearly as much carbon as the Earths atmosphere. To investigate the roles of planktonic marine microbes in the biogeochemical... -
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB...
