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pVCR94 Bet/Exo-mediated scars sequencing and HDTM data
Fasta files for illumina NextSeq sequencing of pVCR94X2 conjugative plasmids reparation scars and Fastq files for HDTM raw data -
The Epigenomic Landscape of Prokaryotes
DNA methylation is an important regulator of genome function in the eukaryotes, but it is currently unclear if the same is true in prokaryotes. While regulatory functions have... -
pooling of Dickeya dadantii, Escherichia coli and Vibrio natriegens samples f...
This project contains DNA and RNA sequencing data of pooled and single samples of Dickeya dadantii, Escherichia coli and Vibrio natriegens -
CRISPR SWAPnDROP
DNA sequencing data for genomic edits in Escherichia coli, Dickeya dadantii and Vibrio natriegens -
Identification of methylase specificity in micro-organisms genomes
Here, we present a new method called RIMS-seq (Rapid Identification of Methylase Specificity) to simultaneously sequence bacterial genomes and determine m5C methylase... -
Conservation of genomic information in multiple displacement amplified low-qu...
Marine invertebrates and their microbiomes have been a rich source of bioactive compounds and interesting genomic features. However, factors such as which species and tissue are... -
Alternative_Enzymes_2022_microbial_genomes
These datasets are generated from Illumina library templates from commercially available Bordetella pertussis, Escherichia coli, Clostridioides difficile and Plasmodium... -
Comparison of sequencing bias for library preparation kit
In this study, sequencing biases in bacterial genome sequencing introduced by currently available library preparation kits for Illumina sequencer were compared. Furthermore, we... -
bacterial multiDAP
Escherichia coli and Pseudomonas simiae transcription factor binding sites mapped in 48 bacterial genomes -
Whole-genome sequencing of bacteria, fungi, plants, and metagenomes
Species and metagenomic samples used for the FELIX (Finding Engineering-Linked Indicators) project. -
Transcript error studies on Escherichia coli, Bacillus subtilis, Agrobacteriu...
The goal of this study is to evaluate transcriptional fidelity of Escherichia coli, Bacillus subtilis, Agrobacterium tumefaciens, and Mesoplasma florum. Sequencing libraries... -
Parallelized screening of virus accessory genes reveals diverse defense and c...
Genomes of bacterial and archaeal viruses are replete with fast-evolving, uncharacterized accessory genes (AGs), most of which likely antagonize host defenses or other viruses.... -
Pacific Biosciences Model Organism Genome Sequencing
DNA from three model organisms (Yeast, Flowering plant, and Fruit Fly) have been sequenced and de novo assembled using the PacBio RS II insrument
