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Biological rejuvenation of iron oxides in bioturbated marine sediments
This project seeked to understand the distribution of iron-oxidizing Zetaproteobacteria in coastal marine sediments, which could allude to their importance to the Fe cycle in... -
Hypoxia alters the iron biogeochemical cycle in bioturbated coastal sediments
Coastal sediments are important sources of bioavailable dissolved iron driving primary production in surface waters. The widespread presence of low oxygen regions in coastal... -
Accuracy of sediment eDNA metabarcoding for assessment of impact from offshor...
We applied eDNA metabarcoding to sequence the metazoan (COI marker), and total eukaryotic (18S marker) benthic components. We targeted a gradient of sites ranging from high to... -
16S amplicon sequencing of epilithic bacterial communities
Epilithic bacterial assemblages on subtidal rocky reefs:</p><p>Variation among alternative habitats at ambient and enhanced nutrient levels -
Seasonal iron biogeochemical cycle in a bioturbated intertidal mudflat
Iron is an important macronutrient for life an is also an essential electron donor and acceptor in microbial energy metabolism. Numerous, interdependent biological, chemical,... -
The impact of DNA extract homogenization and replication on marine sediment m...
Using the 18S V1-V2 region marker data, we show that a homogenizer protocol during DNA extraction can significantly improve sediment metabarcoding results in terms of captured... -
Spatial study of metabarcoding sediment data
The purpose of this data is to make a comparative ecological analysis of sediment metabarcoding data alpha and diversity within sediment sample, within grab and between grabs,...
