14 datasets found

The genomic shock hypothesis stipulates that the stress associated with divergent genomes admixture can cause transposable elements (TEs) derepression which could act as a...

Sequencing files used in analysis of the benefits of STACKS clonefilter on sequencing data.

Short-reads whole-genome sequencing of 32 samples of Coregonus clupeaformis used to investigate the genetic architecture of speciation between Dwarf and Normal species

Genome assembly of the whitefish (Coregonus clupeaformis)

Comparative transcriptomic across limnetic and benthic species-pairs within the Coregonus species complex

Low-coverage whole-genome sequencing of Lake Whitefish from Great Slave Lake that was used for population genomics analyses

This study aimed to look at gene expression at the embryonic stage of pure dwarf and normal individuals, F1-hybrids and backcrosses.

In Lake Erie, lake whitefish Coregonus clupeaformis supported lucrative fisheries before populations were decimated by overfishing and water quality degradation. In recent...

Transcriptome analysis of 10 lake whitefish tissues

This is a modified ddRADSeq approach of 8 Lake Whitefish individuals. Tissue was extracted from each individual from 0 hours (blood and muscle), 12, 48 and 96 hours of...

Whole genome bisulfite sequencing of whitefish species-pairs in order to identify shared contrasted print of DNA methylation between species in order to quantify the relative...

Using Genomics to Improve Stock Structure Resolution and Assess Recruitment Dynamics of Lake Whitefish (Coregonus clupeaformis) in Lake Michigan

Next generation sequencing allows the discovery of large numbers of single nucleotide polymorphisms in species where little genomic information was previously available. Here,...

Genome assembly of a dwarf whitefish (Coregonus clupeaformis)