Dataset - B2FIND

metatranscriptomic approaches to unravel taxonomic and functional diversities...

Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and...

Marine metagenomes from the bioGEOTRACES project

Marine metagenomes from the bioGEOTRACES project Metagenome

Temporal sampling of marine metagenomes from Station ALOHA and BATS

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Metagenomic analysis of marine coastal waters

Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using...

Metagenomic investigation of six depths from the anchialine Bundera sinkhole

Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community...

EMG produced TPA metagenomics assembly of the Marine microbial community from...

The marine sediment metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA336774. This project includes...

EMG produced TPA metagenomics assembly of the Pelagic marine microbial commun...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365008. This project includes samples from...

marine metagenome Metagenome

To study the effect of diesel oil spills on microbial communities in the monitored basin experiment

Peruvian eddy shotgun metagenomes

Shotgun metagenomes sampled from a mesoscale water eddy during strong upwelling conditions in Eastern tropical South Pacific waters off the Peruvian coast, February to March 2013.

The effect of viruses on the dynamics of harmful algal blooms

Surface water from areas experiencing harmful algal blooms were collected either at the beginning or during the termination of the bloom. The water was size fractionated, and...

EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods

This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB...