40 datasets found

When working with genome annotations, you'll likely encounter a long list of KO numbers. In such cases, you might want to include the entire KEGG hierarchy in your annotations...

Trajectories and topology files for CALVADOS simulations. Molecular dynamics simulations validate interactions between candidate therapeutic peptides and brain-derived...

Phage Surface Display Next-Generation Sequencing data of screenings for peptides with a high affinity for Europium(III) ions (Eu3+). The experiments involved conducting multiple...

When working with genome annotations, you'll likely encounter a long list of KO numbers. In such cases, you might want to include the entire KEGG hierarchy in your annotations...

The datasets in this repository contain simulated data and results from their analyses, which can be used to replicate the results in the paper "seqwrap: an R package for...

Trajectories and topology files for CALVADOS simulations. Molecular dynamics simulations validate interactions between candidate therapeutic peptides and brain-derived...

The dataset is created for use in the teaching of the undergraduate course BINF200 - Analysis of Biological Sequences and Structures, first used in Autumn 2023. The dataset...

RO-crate containing reads, assemblies and bins, of 3 metagenomic datasets of increasing complexity, used to showcase the Mapler pipeline (https://github.com/Nimauric/Mapler)

This dataset comprises predicted protein structures from the paper "Ultrafast end-to-end protein structure prediction enables high-throughput exploration of uncharacterized...

CATH is a classification of protein structures downloaded from the Protein Data Bank. We group protein domains into superfamilies when there is sufficient evidence they...

Presentation from EMBO workshop - Mesenchymal cells in inflammation and Cancer - Athens May 2019

MATLAB https://www.actonlab.co.uk/gap-analysis-matlab/ Instructions to carry out gap analysis on network images. Previously used in https://www.nature.com/articles/nature13814

These are the data sets required to generate the figures in our paper 'Changes in ESCRT-III filament geometry drive membrane remodelling and fission in...

Raw data to accompany figure 2 - Effects of CLEC-2 on ECM production by FRCsIncludes sample list in all format and and fastq files from RNAseq runs.Data set 28GBAbstractLymph...

CellDesigner files describing pathogenesis pathways and Cytoscape files describing protein-protein interactions of potential relevance in age-related macular degeneration.By...

Very basic programs created in MATLAB to align either nucleotide or protein sequences.

Encrypted Dataset #1 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. Dataset comprises encrypted genotypes of 500 subjects at...

Encrypted Dataset #2 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. IMPORTANT UPDATE 09/10/2020Data have been replaced with...

T cell receptor sequence data of alopecia patients before and during sensitisation with diphenylcyclopropenone and healthy volunteers at equivalent timepoints, using the UCL...

T cell receptor sequence data of 26 people living with HIV on long-term anti-retroviral therapy, and 12 HIV-negative healthy controls, produced using the UCL Chain lab protocol....